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Entry type
Status
Per-residue features
Colour by
Protein
GBC53668.1
Length
676 amino acids
Protein family membership
- Pre-mRNA-splicing factor Cwf15/Cwc15 (IPR006973)
Domains and repeats
-
Domain209 - 311
- LSM domain (IPR010920)
- Lsm14-like, N-terminal (IPR025609)
503 - 539- DFDF domain (IPR025762)
566 - 582- FFD box (IPR025761)
601 - 621- TFG box (IPR025768)
- LSM domain (IPR010920)
-
Domain509 - 621
- FDF domain (IPR019050)
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200
300
400
500
600
676
Detailed signature matches

Unintegrated signatures
-
mobidb-lite (disord...)92 - 1181 - 21373 - 434535 - 566134 - 160291 - 325461 - 514581 - 676
Residue annotation
-
Sm1 motif cd01736219ISm1 motif
219I, 220S, 221L, 222I, 223S, 224K, 225S, 227I, 228R, 229Y, 230V, 231G, 232I, 233L, 234H, 235S, 236I, 237N, 238S, 239A, 242T, 243V, 244A, 245L, 246E
CDD
cd01736 (LSm14_N)220SSm1 motif
219I, 220S, 221L, 222I, 223S, 224K, 225S, 227I, 228R, 229Y, 230V, 231G, 232I, 233L, 234H, 235S, 236I, 237N, 238S, 239A, 242T, 243V, 244A, 245L, 246E
CDD
cd01736 (LSm14_N)221LSm1 motif
219I, 220S, 221L, 222I, 223S, 224K, 225S, 227I, 228R, 229Y, 230V, 231G, 232I, 233L, 234H, 235S, 236I, 237N, 238S, 239A, 242T, 243V, 244A, 245L, 246E
CDD
cd01736 (LSm14_N)222ISm1 motif
219I, 220S, 221L, 222I, 223S, 224K, 225S, 227I, 228R, 229Y, 230V, 231G, 232I, 233L, 234H, 235S, 236I, 237N, 238S, 239A, 242T, 243V, 244A, 245L, 246E
CDD
cd01736 (LSm14_N)223SSm1 motif
219I, 220S, 221L, 222I, 223S, 224K, 225S, 227I, 228R, 229Y, 230V, 231G, 232I, 233L, 234H, 235S, 236I, 237N, 238S, 239A, 242T, 243V, 244A, 245L, 246E
CDD
cd01736 (LSm14_N)224KSm1 motif
219I, 220S, 221L, 222I, 223S, 224K, 225S, 227I, 228R, 229Y, 230V, 231G, 232I, 233L, 234H, 235S, 236I, 237N, 238S, 239A, 242T, 243V, 244A, 245L, 246E
CDD
cd01736 (LSm14_N)225SSm1 motif
219I, 220S, 221L, 222I, 223S, 224K, 225S, 227I, 228R, 229Y, 230V, 231G, 232I, 233L, 234H, 235S, 236I, 237N, 238S, 239A, 242T, 243V, 244A, 245L, 246E
CDD
cd01736 (LSm14_N)227ISm1 motif
219I, 220S, 221L, 222I, 223S, 224K, 225S, 227I, 228R, 229Y, 230V, 231G, 232I, 233L, 234H, 235S, 236I, 237N, 238S, 239A, 242T, 243V, 244A, 245L, 246E
CDD
cd01736 (LSm14_N)228RSm1 motif
219I, 220S, 221L, 222I, 223S, 224K, 225S, 227I, 228R, 229Y, 230V, 231G, 232I, 233L, 234H, 235S, 236I, 237N, 238S, 239A, 242T, 243V, 244A, 245L, 246E
CDD
cd01736 (LSm14_N)229YSm1 motif
219I, 220S, 221L, 222I, 223S, 224K, 225S, 227I, 228R, 229Y, 230V, 231G, 232I, 233L, 234H, 235S, 236I, 237N, 238S, 239A, 242T, 243V, 244A, 245L, 246E
CDD
cd01736 (LSm14_N)230VSm1 motif
219I, 220S, 221L, 222I, 223S, 224K, 225S, 227I, 228R, 229Y, 230V, 231G, 232I, 233L, 234H, 235S, 236I, 237N, 238S, 239A, 242T, 243V, 244A, 245L, 246E
CDD
cd01736 (LSm14_N)231GSm1 motif
219I, 220S, 221L, 222I, 223S, 224K, 225S, 227I, 228R, 229Y, 230V, 231G, 232I, 233L, 234H, 235S, 236I, 237N, 238S, 239A, 242T, 243V, 244A, 245L, 246E
CDD
cd01736 (LSm14_N)232ISm1 motif
219I, 220S, 221L, 222I, 223S, 224K, 225S, 227I, 228R, 229Y, 230V, 231G, 232I, 233L, 234H, 235S, 236I, 237N, 238S, 239A, 242T, 243V, 244A, 245L, 246E
CDD
cd01736 (LSm14_N)233LSm1 motif
219I, 220S, 221L, 222I, 223S, 224K, 225S, 227I, 228R, 229Y, 230V, 231G, 232I, 233L, 234H, 235S, 236I, 237N, 238S, 239A, 242T, 243V, 244A, 245L, 246E
CDD
cd01736 (LSm14_N)234HSm1 motif
219I, 220S, 221L, 222I, 223S, 224K, 225S, 227I, 228R, 229Y, 230V, 231G, 232I, 233L, 234H, 235S, 236I, 237N, 238S, 239A, 242T, 243V, 244A, 245L, 246E
CDD
cd01736 (LSm14_N)235SSm1 motif
219I, 220S, 221L, 222I, 223S, 224K, 225S, 227I, 228R, 229Y, 230V, 231G, 232I, 233L, 234H, 235S, 236I, 237N, 238S, 239A, 242T, 243V, 244A, 245L, 246E
CDD
cd01736 (LSm14_N)236ISm1 motif
219I, 220S, 221L, 222I, 223S, 224K, 225S, 227I, 228R, 229Y, 230V, 231G, 232I, 233L, 234H, 235S, 236I, 237N, 238S, 239A, 242T, 243V, 244A, 245L, 246E
CDD
cd01736 (LSm14_N)237NSm1 motif
219I, 220S, 221L, 222I, 223S, 224K, 225S, 227I, 228R, 229Y, 230V, 231G, 232I, 233L, 234H, 235S, 236I, 237N, 238S, 239A, 242T, 243V, 244A, 245L, 246E
CDD
cd01736 (LSm14_N)238SSm1 motif
219I, 220S, 221L, 222I, 223S, 224K, 225S, 227I, 228R, 229Y, 230V, 231G, 232I, 233L, 234H, 235S, 236I, 237N, 238S, 239A, 242T, 243V, 244A, 245L, 246E
CDD
cd01736 (LSm14_N)239ASm1 motif
219I, 220S, 221L, 222I, 223S, 224K, 225S, 227I, 228R, 229Y, 230V, 231G, 232I, 233L, 234H, 235S, 236I, 237N, 238S, 239A, 242T, 243V, 244A, 245L, 246E
CDD
cd01736 (LSm14_N)242TSm1 motif
219I, 220S, 221L, 222I, 223S, 224K, 225S, 227I, 228R, 229Y, 230V, 231G, 232I, 233L, 234H, 235S, 236I, 237N, 238S, 239A, 242T, 243V, 244A, 245L, 246E
CDD
cd01736 (LSm14_N)243VSm1 motif
219I, 220S, 221L, 222I, 223S, 224K, 225S, 227I, 228R, 229Y, 230V, 231G, 232I, 233L, 234H, 235S, 236I, 237N, 238S, 239A, 242T, 243V, 244A, 245L, 246E
CDD
cd01736 (LSm14_N)244ASm1 motif
219I, 220S, 221L, 222I, 223S, 224K, 225S, 227I, 228R, 229Y, 230V, 231G, 232I, 233L, 234H, 235S, 236I, 237N, 238S, 239A, 242T, 243V, 244A, 245L, 246E
CDD
cd01736 (LSm14_N)245LSm1 motif
219I, 220S, 221L, 222I, 223S, 224K, 225S, 227I, 228R, 229Y, 230V, 231G, 232I, 233L, 234H, 235S, 236I, 237N, 238S, 239A, 242T, 243V, 244A, 245L, 246E
CDD
cd01736 (LSm14_N)246ESm1 motif
219I, 220S, 221L, 222I, 223S, 224K, 225S, 227I, 228R, 229Y, 230V, 231G, 232I, 233L, 234H, 235S, 236I, 237N, 238S, 239A, 242T, 243V, 244A, 245L, 246E
CDD
cd01736 (LSm14_N) -
putative RNA bindi...
-
Sm2 motif cd01736273YSm2 motif
273Y, 274I, 275V, 276F, 277R, 278G, 279S, 280D, 281V, 282K, 283D, 284L
CDD
cd01736 (LSm14_N)274ISm2 motif
273Y, 274I, 275V, 276F, 277R, 278G, 279S, 280D, 281V, 282K, 283D, 284L
CDD
cd01736 (LSm14_N)275VSm2 motif
273Y, 274I, 275V, 276F, 277R, 278G, 279S, 280D, 281V, 282K, 283D, 284L
CDD
cd01736 (LSm14_N)276FSm2 motif
273Y, 274I, 275V, 276F, 277R, 278G, 279S, 280D, 281V, 282K, 283D, 284L
CDD
cd01736 (LSm14_N)277RSm2 motif
273Y, 274I, 275V, 276F, 277R, 278G, 279S, 280D, 281V, 282K, 283D, 284L
CDD
cd01736 (LSm14_N)278GSm2 motif
273Y, 274I, 275V, 276F, 277R, 278G, 279S, 280D, 281V, 282K, 283D, 284L
CDD
cd01736 (LSm14_N)279SSm2 motif
273Y, 274I, 275V, 276F, 277R, 278G, 279S, 280D, 281V, 282K, 283D, 284L
CDD
cd01736 (LSm14_N)280DSm2 motif
273Y, 274I, 275V, 276F, 277R, 278G, 279S, 280D, 281V, 282K, 283D, 284L
CDD
cd01736 (LSm14_N)281VSm2 motif
273Y, 274I, 275V, 276F, 277R, 278G, 279S, 280D, 281V, 282K, 283D, 284L
CDD
cd01736 (LSm14_N)282KSm2 motif
273Y, 274I, 275V, 276F, 277R, 278G, 279S, 280D, 281V, 282K, 283D, 284L
CDD
cd01736 (LSm14_N)283DSm2 motif
273Y, 274I, 275V, 276F, 277R, 278G, 279S, 280D, 281V, 282K, 283D, 284L
CDD
cd01736 (LSm14_N)284LSm2 motif
273Y, 274I, 275V, 276F, 277R, 278G, 279S, 280D, 281V, 282K, 283D, 284L
CDD
cd01736 (LSm14_N)
GO term prediction
Biological Process
GO:0000398 mRNA splicing, via spliceosome
Molecular Function
None predicted.
Cellular Component
GO:0005681 spliceosomal complex