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Entry type
Status
Per-residue features
Colour by
Protein
GBC53660.1
Length
873 amino acids
Protein family membership
None predicted.
Domains and repeats
-
Domain403 - 430
- Zinc finger, CCCH-type (IPR000571)
494 - 821- Armadillo-type fold (IPR016024)
- Pumilio homology domain (IPR033133)
- Pumilio, RNA binding domain (IPR033712)
- Pumilio homology domain (IPR033133)
-
Repeat107 - 144
- Pumilio RNA-binding repeat (IPR001313)
515 - 550- Pumilio RNA-binding repeat (IPR001313)
566 - 605- Pumilio RNA-binding repeat (IPR001313)
614 - 649- Pumilio RNA-binding repeat (IPR001313)
649 - 685- Pumilio RNA-binding repeat (IPR001313)
686 - 721- Pumilio RNA-binding repeat (IPR001313)
722 - 757- Pumilio RNA-binding repeat (IPR001313)
758 - 795- Pumilio RNA-binding repeat (IPR001313)
1
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200
300
400
500
600
700
800
873
Detailed signature matches
no IPR
Unintegrated signatures
-
mobidb-lite (disord...)1 - 73159 - 203215 - 239
Residue annotation
-
RNA binding site c...581TRNA binding site
581T, 582R, 585Q, 630H, 633Q, 665C, 666C, 669Q, 698P, 699F, 701N, 702Y, 705Q, 734K, 735F, 737S, 738N, 741E, 772S, 773Y, 775N, 776Y, 779Q, 809Y, 812R
CDD
cd07920 (Pumilio)582RRNA binding site
581T, 582R, 585Q, 630H, 633Q, 665C, 666C, 669Q, 698P, 699F, 701N, 702Y, 705Q, 734K, 735F, 737S, 738N, 741E, 772S, 773Y, 775N, 776Y, 779Q, 809Y, 812R
CDD
cd07920 (Pumilio)585QRNA binding site
581T, 582R, 585Q, 630H, 633Q, 665C, 666C, 669Q, 698P, 699F, 701N, 702Y, 705Q, 734K, 735F, 737S, 738N, 741E, 772S, 773Y, 775N, 776Y, 779Q, 809Y, 812R
CDD
cd07920 (Pumilio)630HRNA binding site
581T, 582R, 585Q, 630H, 633Q, 665C, 666C, 669Q, 698P, 699F, 701N, 702Y, 705Q, 734K, 735F, 737S, 738N, 741E, 772S, 773Y, 775N, 776Y, 779Q, 809Y, 812R
CDD
cd07920 (Pumilio)633QRNA binding site
581T, 582R, 585Q, 630H, 633Q, 665C, 666C, 669Q, 698P, 699F, 701N, 702Y, 705Q, 734K, 735F, 737S, 738N, 741E, 772S, 773Y, 775N, 776Y, 779Q, 809Y, 812R
CDD
cd07920 (Pumilio)665CRNA binding site
581T, 582R, 585Q, 630H, 633Q, 665C, 666C, 669Q, 698P, 699F, 701N, 702Y, 705Q, 734K, 735F, 737S, 738N, 741E, 772S, 773Y, 775N, 776Y, 779Q, 809Y, 812R
CDD
cd07920 (Pumilio)666CRNA binding site
581T, 582R, 585Q, 630H, 633Q, 665C, 666C, 669Q, 698P, 699F, 701N, 702Y, 705Q, 734K, 735F, 737S, 738N, 741E, 772S, 773Y, 775N, 776Y, 779Q, 809Y, 812R
CDD
cd07920 (Pumilio)669QRNA binding site
581T, 582R, 585Q, 630H, 633Q, 665C, 666C, 669Q, 698P, 699F, 701N, 702Y, 705Q, 734K, 735F, 737S, 738N, 741E, 772S, 773Y, 775N, 776Y, 779Q, 809Y, 812R
CDD
cd07920 (Pumilio)698PRNA binding site
581T, 582R, 585Q, 630H, 633Q, 665C, 666C, 669Q, 698P, 699F, 701N, 702Y, 705Q, 734K, 735F, 737S, 738N, 741E, 772S, 773Y, 775N, 776Y, 779Q, 809Y, 812R
CDD
cd07920 (Pumilio)699FRNA binding site
581T, 582R, 585Q, 630H, 633Q, 665C, 666C, 669Q, 698P, 699F, 701N, 702Y, 705Q, 734K, 735F, 737S, 738N, 741E, 772S, 773Y, 775N, 776Y, 779Q, 809Y, 812R
CDD
cd07920 (Pumilio)701NRNA binding site
581T, 582R, 585Q, 630H, 633Q, 665C, 666C, 669Q, 698P, 699F, 701N, 702Y, 705Q, 734K, 735F, 737S, 738N, 741E, 772S, 773Y, 775N, 776Y, 779Q, 809Y, 812R
CDD
cd07920 (Pumilio)702YRNA binding site
581T, 582R, 585Q, 630H, 633Q, 665C, 666C, 669Q, 698P, 699F, 701N, 702Y, 705Q, 734K, 735F, 737S, 738N, 741E, 772S, 773Y, 775N, 776Y, 779Q, 809Y, 812R
CDD
cd07920 (Pumilio)705QRNA binding site
581T, 582R, 585Q, 630H, 633Q, 665C, 666C, 669Q, 698P, 699F, 701N, 702Y, 705Q, 734K, 735F, 737S, 738N, 741E, 772S, 773Y, 775N, 776Y, 779Q, 809Y, 812R
CDD
cd07920 (Pumilio)734KRNA binding site
581T, 582R, 585Q, 630H, 633Q, 665C, 666C, 669Q, 698P, 699F, 701N, 702Y, 705Q, 734K, 735F, 737S, 738N, 741E, 772S, 773Y, 775N, 776Y, 779Q, 809Y, 812R
CDD
cd07920 (Pumilio)735FRNA binding site
581T, 582R, 585Q, 630H, 633Q, 665C, 666C, 669Q, 698P, 699F, 701N, 702Y, 705Q, 734K, 735F, 737S, 738N, 741E, 772S, 773Y, 775N, 776Y, 779Q, 809Y, 812R
CDD
cd07920 (Pumilio)737SRNA binding site
581T, 582R, 585Q, 630H, 633Q, 665C, 666C, 669Q, 698P, 699F, 701N, 702Y, 705Q, 734K, 735F, 737S, 738N, 741E, 772S, 773Y, 775N, 776Y, 779Q, 809Y, 812R
CDD
cd07920 (Pumilio)738NRNA binding site
581T, 582R, 585Q, 630H, 633Q, 665C, 666C, 669Q, 698P, 699F, 701N, 702Y, 705Q, 734K, 735F, 737S, 738N, 741E, 772S, 773Y, 775N, 776Y, 779Q, 809Y, 812R
CDD
cd07920 (Pumilio)741ERNA binding site
581T, 582R, 585Q, 630H, 633Q, 665C, 666C, 669Q, 698P, 699F, 701N, 702Y, 705Q, 734K, 735F, 737S, 738N, 741E, 772S, 773Y, 775N, 776Y, 779Q, 809Y, 812R
CDD
cd07920 (Pumilio)772SRNA binding site
581T, 582R, 585Q, 630H, 633Q, 665C, 666C, 669Q, 698P, 699F, 701N, 702Y, 705Q, 734K, 735F, 737S, 738N, 741E, 772S, 773Y, 775N, 776Y, 779Q, 809Y, 812R
CDD
cd07920 (Pumilio)773YRNA binding site
581T, 582R, 585Q, 630H, 633Q, 665C, 666C, 669Q, 698P, 699F, 701N, 702Y, 705Q, 734K, 735F, 737S, 738N, 741E, 772S, 773Y, 775N, 776Y, 779Q, 809Y, 812R
CDD
cd07920 (Pumilio)775NRNA binding site
581T, 582R, 585Q, 630H, 633Q, 665C, 666C, 669Q, 698P, 699F, 701N, 702Y, 705Q, 734K, 735F, 737S, 738N, 741E, 772S, 773Y, 775N, 776Y, 779Q, 809Y, 812R
CDD
cd07920 (Pumilio)776YRNA binding site
581T, 582R, 585Q, 630H, 633Q, 665C, 666C, 669Q, 698P, 699F, 701N, 702Y, 705Q, 734K, 735F, 737S, 738N, 741E, 772S, 773Y, 775N, 776Y, 779Q, 809Y, 812R
CDD
cd07920 (Pumilio)779QRNA binding site
581T, 582R, 585Q, 630H, 633Q, 665C, 666C, 669Q, 698P, 699F, 701N, 702Y, 705Q, 734K, 735F, 737S, 738N, 741E, 772S, 773Y, 775N, 776Y, 779Q, 809Y, 812R
CDD
cd07920 (Pumilio)809YRNA binding site
581T, 582R, 585Q, 630H, 633Q, 665C, 666C, 669Q, 698P, 699F, 701N, 702Y, 705Q, 734K, 735F, 737S, 738N, 741E, 772S, 773Y, 775N, 776Y, 779Q, 809Y, 812R
CDD
cd07920 (Pumilio)812RRNA binding site
581T, 582R, 585Q, 630H, 633Q, 665C, 666C, 669Q, 698P, 699F, 701N, 702Y, 705Q, 734K, 735F, 737S, 738N, 741E, 772S, 773Y, 775N, 776Y, 779Q, 809Y, 812R
CDD
cd07920 (Pumilio)
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0003723 RNA binding
GO:0005488 binding
GO:0046872 metal ion binding
Cellular Component
None predicted.