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Entry type
Status
Per-residue features
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Protein
GBC53658.1
Length
867 amino acids
Protein family membership
None predicted.
Domains and repeats
-
Domain397 - 424
- Zinc finger, CCCH-type (IPR000571)
488 - 815- Armadillo-type fold (IPR016024)
- Pumilio homology domain (IPR033133)
- Pumilio, RNA binding domain (IPR033712)
- Pumilio homology domain (IPR033133)
-
Repeat107 - 144
- Pumilio RNA-binding repeat (IPR001313)
509 - 544- Pumilio RNA-binding repeat (IPR001313)
560 - 599- Pumilio RNA-binding repeat (IPR001313)
608 - 643- Pumilio RNA-binding repeat (IPR001313)
643 - 679- Pumilio RNA-binding repeat (IPR001313)
680 - 715- Pumilio RNA-binding repeat (IPR001313)
716 - 751- Pumilio RNA-binding repeat (IPR001313)
752 - 789- Pumilio RNA-binding repeat (IPR001313)
1
100
200
300
400
500
600
700
800
867
Detailed signature matches
no IPR
Unintegrated signatures
-
mobidb-lite (disord...)215 - 2371 - 73159 - 203
Residue annotation
-
RNA binding site c...575TRNA binding site
575T, 576R, 579Q, 624H, 627Q, 659C, 660C, 663Q, 692P, 693F, 695N, 696Y, 699Q, 728K, 729F, 731S, 732N, 735E, 766S, 767Y, 769N, 770Y, 773Q, 803Y, 806R
CDD
cd07920 (Pumilio)576RRNA binding site
575T, 576R, 579Q, 624H, 627Q, 659C, 660C, 663Q, 692P, 693F, 695N, 696Y, 699Q, 728K, 729F, 731S, 732N, 735E, 766S, 767Y, 769N, 770Y, 773Q, 803Y, 806R
CDD
cd07920 (Pumilio)579QRNA binding site
575T, 576R, 579Q, 624H, 627Q, 659C, 660C, 663Q, 692P, 693F, 695N, 696Y, 699Q, 728K, 729F, 731S, 732N, 735E, 766S, 767Y, 769N, 770Y, 773Q, 803Y, 806R
CDD
cd07920 (Pumilio)624HRNA binding site
575T, 576R, 579Q, 624H, 627Q, 659C, 660C, 663Q, 692P, 693F, 695N, 696Y, 699Q, 728K, 729F, 731S, 732N, 735E, 766S, 767Y, 769N, 770Y, 773Q, 803Y, 806R
CDD
cd07920 (Pumilio)627QRNA binding site
575T, 576R, 579Q, 624H, 627Q, 659C, 660C, 663Q, 692P, 693F, 695N, 696Y, 699Q, 728K, 729F, 731S, 732N, 735E, 766S, 767Y, 769N, 770Y, 773Q, 803Y, 806R
CDD
cd07920 (Pumilio)659CRNA binding site
575T, 576R, 579Q, 624H, 627Q, 659C, 660C, 663Q, 692P, 693F, 695N, 696Y, 699Q, 728K, 729F, 731S, 732N, 735E, 766S, 767Y, 769N, 770Y, 773Q, 803Y, 806R
CDD
cd07920 (Pumilio)660CRNA binding site
575T, 576R, 579Q, 624H, 627Q, 659C, 660C, 663Q, 692P, 693F, 695N, 696Y, 699Q, 728K, 729F, 731S, 732N, 735E, 766S, 767Y, 769N, 770Y, 773Q, 803Y, 806R
CDD
cd07920 (Pumilio)663QRNA binding site
575T, 576R, 579Q, 624H, 627Q, 659C, 660C, 663Q, 692P, 693F, 695N, 696Y, 699Q, 728K, 729F, 731S, 732N, 735E, 766S, 767Y, 769N, 770Y, 773Q, 803Y, 806R
CDD
cd07920 (Pumilio)692PRNA binding site
575T, 576R, 579Q, 624H, 627Q, 659C, 660C, 663Q, 692P, 693F, 695N, 696Y, 699Q, 728K, 729F, 731S, 732N, 735E, 766S, 767Y, 769N, 770Y, 773Q, 803Y, 806R
CDD
cd07920 (Pumilio)693FRNA binding site
575T, 576R, 579Q, 624H, 627Q, 659C, 660C, 663Q, 692P, 693F, 695N, 696Y, 699Q, 728K, 729F, 731S, 732N, 735E, 766S, 767Y, 769N, 770Y, 773Q, 803Y, 806R
CDD
cd07920 (Pumilio)695NRNA binding site
575T, 576R, 579Q, 624H, 627Q, 659C, 660C, 663Q, 692P, 693F, 695N, 696Y, 699Q, 728K, 729F, 731S, 732N, 735E, 766S, 767Y, 769N, 770Y, 773Q, 803Y, 806R
CDD
cd07920 (Pumilio)696YRNA binding site
575T, 576R, 579Q, 624H, 627Q, 659C, 660C, 663Q, 692P, 693F, 695N, 696Y, 699Q, 728K, 729F, 731S, 732N, 735E, 766S, 767Y, 769N, 770Y, 773Q, 803Y, 806R
CDD
cd07920 (Pumilio)699QRNA binding site
575T, 576R, 579Q, 624H, 627Q, 659C, 660C, 663Q, 692P, 693F, 695N, 696Y, 699Q, 728K, 729F, 731S, 732N, 735E, 766S, 767Y, 769N, 770Y, 773Q, 803Y, 806R
CDD
cd07920 (Pumilio)728KRNA binding site
575T, 576R, 579Q, 624H, 627Q, 659C, 660C, 663Q, 692P, 693F, 695N, 696Y, 699Q, 728K, 729F, 731S, 732N, 735E, 766S, 767Y, 769N, 770Y, 773Q, 803Y, 806R
CDD
cd07920 (Pumilio)729FRNA binding site
575T, 576R, 579Q, 624H, 627Q, 659C, 660C, 663Q, 692P, 693F, 695N, 696Y, 699Q, 728K, 729F, 731S, 732N, 735E, 766S, 767Y, 769N, 770Y, 773Q, 803Y, 806R
CDD
cd07920 (Pumilio)731SRNA binding site
575T, 576R, 579Q, 624H, 627Q, 659C, 660C, 663Q, 692P, 693F, 695N, 696Y, 699Q, 728K, 729F, 731S, 732N, 735E, 766S, 767Y, 769N, 770Y, 773Q, 803Y, 806R
CDD
cd07920 (Pumilio)732NRNA binding site
575T, 576R, 579Q, 624H, 627Q, 659C, 660C, 663Q, 692P, 693F, 695N, 696Y, 699Q, 728K, 729F, 731S, 732N, 735E, 766S, 767Y, 769N, 770Y, 773Q, 803Y, 806R
CDD
cd07920 (Pumilio)735ERNA binding site
575T, 576R, 579Q, 624H, 627Q, 659C, 660C, 663Q, 692P, 693F, 695N, 696Y, 699Q, 728K, 729F, 731S, 732N, 735E, 766S, 767Y, 769N, 770Y, 773Q, 803Y, 806R
CDD
cd07920 (Pumilio)766SRNA binding site
575T, 576R, 579Q, 624H, 627Q, 659C, 660C, 663Q, 692P, 693F, 695N, 696Y, 699Q, 728K, 729F, 731S, 732N, 735E, 766S, 767Y, 769N, 770Y, 773Q, 803Y, 806R
CDD
cd07920 (Pumilio)767YRNA binding site
575T, 576R, 579Q, 624H, 627Q, 659C, 660C, 663Q, 692P, 693F, 695N, 696Y, 699Q, 728K, 729F, 731S, 732N, 735E, 766S, 767Y, 769N, 770Y, 773Q, 803Y, 806R
CDD
cd07920 (Pumilio)769NRNA binding site
575T, 576R, 579Q, 624H, 627Q, 659C, 660C, 663Q, 692P, 693F, 695N, 696Y, 699Q, 728K, 729F, 731S, 732N, 735E, 766S, 767Y, 769N, 770Y, 773Q, 803Y, 806R
CDD
cd07920 (Pumilio)770YRNA binding site
575T, 576R, 579Q, 624H, 627Q, 659C, 660C, 663Q, 692P, 693F, 695N, 696Y, 699Q, 728K, 729F, 731S, 732N, 735E, 766S, 767Y, 769N, 770Y, 773Q, 803Y, 806R
CDD
cd07920 (Pumilio)773QRNA binding site
575T, 576R, 579Q, 624H, 627Q, 659C, 660C, 663Q, 692P, 693F, 695N, 696Y, 699Q, 728K, 729F, 731S, 732N, 735E, 766S, 767Y, 769N, 770Y, 773Q, 803Y, 806R
CDD
cd07920 (Pumilio)803YRNA binding site
575T, 576R, 579Q, 624H, 627Q, 659C, 660C, 663Q, 692P, 693F, 695N, 696Y, 699Q, 728K, 729F, 731S, 732N, 735E, 766S, 767Y, 769N, 770Y, 773Q, 803Y, 806R
CDD
cd07920 (Pumilio)806RRNA binding site
575T, 576R, 579Q, 624H, 627Q, 659C, 660C, 663Q, 692P, 693F, 695N, 696Y, 699Q, 728K, 729F, 731S, 732N, 735E, 766S, 767Y, 769N, 770Y, 773Q, 803Y, 806R
CDD
cd07920 (Pumilio)
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0003723 RNA binding
GO:0005488 binding
GO:0046872 metal ion binding
Cellular Component
None predicted.