GBC51028.1

Protein

Length

238 amino acids

Protein family membership

60S ribosomal protein L6E (IPR000915)

Domains and repeats

Domain
2 - 46
Ribosomal protein L6, N-terminal (IPR005568)
93 - 176
Translation protein SH3-like domain (IPR008991)

1 50 100 150 200 238

Detailed signature matches

IPR000915

60S ribosomal protein L6E
1. PF01159 (Ribosomal_L6e)
  
  132 - 238
  
  Pfam
  PF01159 (Ribosomal_L6e)
IPR005568

Ribosomal protein L6, N-terminal
1. PF03868 (Ribosomal_...)
  
  2 - 46
  
  Pfam
  PF03868 (Ribosomal_L6e_N)
IPR008991

Translation protein SH3-like domain
1. SSF50104 (Translati...)
  
  93 - 176
  
  SUPERFAMILY
  SSF50104 (Translation proteins SH3-like domain)

no IPR

Unintegrated signatures

cd13156 (KOW_RPL6)

87 - 238

CDD
cd13156 (KOW_RPL6)

Residue annotation

RNA binding site c...

87K

RNA binding site
87K, 89T, 105T, 106G, 107R, 108F, 109R, 111K, 122G, 123L, 130F, 131K, 132V, 133N, 134G, 136P, 138K, 139R, 140V, 141N, 143A, 144Y, 169R, 193S, 196K, 197I, 219D, 222R, 223A, 224R, 228S, 229K
CDD
cd13156 (KOW_RPL6)

89T

RNA binding site
87K, 89T, 105T, 106G, 107R, 108F, 109R, 111K, 122G, 123L, 130F, 131K, 132V, 133N, 134G, 136P, 138K, 139R, 140V, 141N, 143A, 144Y, 169R, 193S, 196K, 197I, 219D, 222R, 223A, 224R, 228S, 229K
CDD
cd13156 (KOW_RPL6)

105T

RNA binding site
87K, 89T, 105T, 106G, 107R, 108F, 109R, 111K, 122G, 123L, 130F, 131K, 132V, 133N, 134G, 136P, 138K, 139R, 140V, 141N, 143A, 144Y, 169R, 193S, 196K, 197I, 219D, 222R, 223A, 224R, 228S, 229K
CDD
cd13156 (KOW_RPL6)

106G

RNA binding site
87K, 89T, 105T, 106G, 107R, 108F, 109R, 111K, 122G, 123L, 130F, 131K, 132V, 133N, 134G, 136P, 138K, 139R, 140V, 141N, 143A, 144Y, 169R, 193S, 196K, 197I, 219D, 222R, 223A, 224R, 228S, 229K
CDD
cd13156 (KOW_RPL6)

107R

RNA binding site
87K, 89T, 105T, 106G, 107R, 108F, 109R, 111K, 122G, 123L, 130F, 131K, 132V, 133N, 134G, 136P, 138K, 139R, 140V, 141N, 143A, 144Y, 169R, 193S, 196K, 197I, 219D, 222R, 223A, 224R, 228S, 229K
CDD
cd13156 (KOW_RPL6)

108F

RNA binding site
87K, 89T, 105T, 106G, 107R, 108F, 109R, 111K, 122G, 123L, 130F, 131K, 132V, 133N, 134G, 136P, 138K, 139R, 140V, 141N, 143A, 144Y, 169R, 193S, 196K, 197I, 219D, 222R, 223A, 224R, 228S, 229K
CDD
cd13156 (KOW_RPL6)

109R

RNA binding site
87K, 89T, 105T, 106G, 107R, 108F, 109R, 111K, 122G, 123L, 130F, 131K, 132V, 133N, 134G, 136P, 138K, 139R, 140V, 141N, 143A, 144Y, 169R, 193S, 196K, 197I, 219D, 222R, 223A, 224R, 228S, 229K
CDD
cd13156 (KOW_RPL6)

111K

RNA binding site
87K, 89T, 105T, 106G, 107R, 108F, 109R, 111K, 122G, 123L, 130F, 131K, 132V, 133N, 134G, 136P, 138K, 139R, 140V, 141N, 143A, 144Y, 169R, 193S, 196K, 197I, 219D, 222R, 223A, 224R, 228S, 229K
CDD
cd13156 (KOW_RPL6)

122G

RNA binding site
87K, 89T, 105T, 106G, 107R, 108F, 109R, 111K, 122G, 123L, 130F, 131K, 132V, 133N, 134G, 136P, 138K, 139R, 140V, 141N, 143A, 144Y, 169R, 193S, 196K, 197I, 219D, 222R, 223A, 224R, 228S, 229K
CDD
cd13156 (KOW_RPL6)

123L

RNA binding site
87K, 89T, 105T, 106G, 107R, 108F, 109R, 111K, 122G, 123L, 130F, 131K, 132V, 133N, 134G, 136P, 138K, 139R, 140V, 141N, 143A, 144Y, 169R, 193S, 196K, 197I, 219D, 222R, 223A, 224R, 228S, 229K
CDD
cd13156 (KOW_RPL6)

130F

RNA binding site
87K, 89T, 105T, 106G, 107R, 108F, 109R, 111K, 122G, 123L, 130F, 131K, 132V, 133N, 134G, 136P, 138K, 139R, 140V, 141N, 143A, 144Y, 169R, 193S, 196K, 197I, 219D, 222R, 223A, 224R, 228S, 229K
CDD
cd13156 (KOW_RPL6)

131K

RNA binding site
87K, 89T, 105T, 106G, 107R, 108F, 109R, 111K, 122G, 123L, 130F, 131K, 132V, 133N, 134G, 136P, 138K, 139R, 140V, 141N, 143A, 144Y, 169R, 193S, 196K, 197I, 219D, 222R, 223A, 224R, 228S, 229K
CDD
cd13156 (KOW_RPL6)

132V

RNA binding site
87K, 89T, 105T, 106G, 107R, 108F, 109R, 111K, 122G, 123L, 130F, 131K, 132V, 133N, 134G, 136P, 138K, 139R, 140V, 141N, 143A, 144Y, 169R, 193S, 196K, 197I, 219D, 222R, 223A, 224R, 228S, 229K
CDD
cd13156 (KOW_RPL6)

133N

RNA binding site
87K, 89T, 105T, 106G, 107R, 108F, 109R, 111K, 122G, 123L, 130F, 131K, 132V, 133N, 134G, 136P, 138K, 139R, 140V, 141N, 143A, 144Y, 169R, 193S, 196K, 197I, 219D, 222R, 223A, 224R, 228S, 229K
CDD
cd13156 (KOW_RPL6)

134G

RNA binding site
87K, 89T, 105T, 106G, 107R, 108F, 109R, 111K, 122G, 123L, 130F, 131K, 132V, 133N, 134G, 136P, 138K, 139R, 140V, 141N, 143A, 144Y, 169R, 193S, 196K, 197I, 219D, 222R, 223A, 224R, 228S, 229K
CDD
cd13156 (KOW_RPL6)

136P

RNA binding site
87K, 89T, 105T, 106G, 107R, 108F, 109R, 111K, 122G, 123L, 130F, 131K, 132V, 133N, 134G, 136P, 138K, 139R, 140V, 141N, 143A, 144Y, 169R, 193S, 196K, 197I, 219D, 222R, 223A, 224R, 228S, 229K
CDD
cd13156 (KOW_RPL6)

138K

RNA binding site
87K, 89T, 105T, 106G, 107R, 108F, 109R, 111K, 122G, 123L, 130F, 131K, 132V, 133N, 134G, 136P, 138K, 139R, 140V, 141N, 143A, 144Y, 169R, 193S, 196K, 197I, 219D, 222R, 223A, 224R, 228S, 229K
CDD
cd13156 (KOW_RPL6)

139R

RNA binding site
87K, 89T, 105T, 106G, 107R, 108F, 109R, 111K, 122G, 123L, 130F, 131K, 132V, 133N, 134G, 136P, 138K, 139R, 140V, 141N, 143A, 144Y, 169R, 193S, 196K, 197I, 219D, 222R, 223A, 224R, 228S, 229K
CDD
cd13156 (KOW_RPL6)

140V

RNA binding site
87K, 89T, 105T, 106G, 107R, 108F, 109R, 111K, 122G, 123L, 130F, 131K, 132V, 133N, 134G, 136P, 138K, 139R, 140V, 141N, 143A, 144Y, 169R, 193S, 196K, 197I, 219D, 222R, 223A, 224R, 228S, 229K
CDD
cd13156 (KOW_RPL6)

141N

RNA binding site
87K, 89T, 105T, 106G, 107R, 108F, 109R, 111K, 122G, 123L, 130F, 131K, 132V, 133N, 134G, 136P, 138K, 139R, 140V, 141N, 143A, 144Y, 169R, 193S, 196K, 197I, 219D, 222R, 223A, 224R, 228S, 229K
CDD
cd13156 (KOW_RPL6)

143A

RNA binding site
87K, 89T, 105T, 106G, 107R, 108F, 109R, 111K, 122G, 123L, 130F, 131K, 132V, 133N, 134G, 136P, 138K, 139R, 140V, 141N, 143A, 144Y, 169R, 193S, 196K, 197I, 219D, 222R, 223A, 224R, 228S, 229K
CDD
cd13156 (KOW_RPL6)

144Y

RNA binding site
87K, 89T, 105T, 106G, 107R, 108F, 109R, 111K, 122G, 123L, 130F, 131K, 132V, 133N, 134G, 136P, 138K, 139R, 140V, 141N, 143A, 144Y, 169R, 193S, 196K, 197I, 219D, 222R, 223A, 224R, 228S, 229K
CDD
cd13156 (KOW_RPL6)

169R

RNA binding site
87K, 89T, 105T, 106G, 107R, 108F, 109R, 111K, 122G, 123L, 130F, 131K, 132V, 133N, 134G, 136P, 138K, 139R, 140V, 141N, 143A, 144Y, 169R, 193S, 196K, 197I, 219D, 222R, 223A, 224R, 228S, 229K
CDD
cd13156 (KOW_RPL6)

193S

RNA binding site
87K, 89T, 105T, 106G, 107R, 108F, 109R, 111K, 122G, 123L, 130F, 131K, 132V, 133N, 134G, 136P, 138K, 139R, 140V, 141N, 143A, 144Y, 169R, 193S, 196K, 197I, 219D, 222R, 223A, 224R, 228S, 229K
CDD
cd13156 (KOW_RPL6)

196K

RNA binding site
87K, 89T, 105T, 106G, 107R, 108F, 109R, 111K, 122G, 123L, 130F, 131K, 132V, 133N, 134G, 136P, 138K, 139R, 140V, 141N, 143A, 144Y, 169R, 193S, 196K, 197I, 219D, 222R, 223A, 224R, 228S, 229K
CDD
cd13156 (KOW_RPL6)

197I

RNA binding site
87K, 89T, 105T, 106G, 107R, 108F, 109R, 111K, 122G, 123L, 130F, 131K, 132V, 133N, 134G, 136P, 138K, 139R, 140V, 141N, 143A, 144Y, 169R, 193S, 196K, 197I, 219D, 222R, 223A, 224R, 228S, 229K
CDD
cd13156 (KOW_RPL6)

219D

RNA binding site
87K, 89T, 105T, 106G, 107R, 108F, 109R, 111K, 122G, 123L, 130F, 131K, 132V, 133N, 134G, 136P, 138K, 139R, 140V, 141N, 143A, 144Y, 169R, 193S, 196K, 197I, 219D, 222R, 223A, 224R, 228S, 229K
CDD
cd13156 (KOW_RPL6)

222R

RNA binding site
87K, 89T, 105T, 106G, 107R, 108F, 109R, 111K, 122G, 123L, 130F, 131K, 132V, 133N, 134G, 136P, 138K, 139R, 140V, 141N, 143A, 144Y, 169R, 193S, 196K, 197I, 219D, 222R, 223A, 224R, 228S, 229K
CDD
cd13156 (KOW_RPL6)

223A

RNA binding site
87K, 89T, 105T, 106G, 107R, 108F, 109R, 111K, 122G, 123L, 130F, 131K, 132V, 133N, 134G, 136P, 138K, 139R, 140V, 141N, 143A, 144Y, 169R, 193S, 196K, 197I, 219D, 222R, 223A, 224R, 228S, 229K
CDD
cd13156 (KOW_RPL6)

224R

RNA binding site
87K, 89T, 105T, 106G, 107R, 108F, 109R, 111K, 122G, 123L, 130F, 131K, 132V, 133N, 134G, 136P, 138K, 139R, 140V, 141N, 143A, 144Y, 169R, 193S, 196K, 197I, 219D, 222R, 223A, 224R, 228S, 229K
CDD
cd13156 (KOW_RPL6)

228S

RNA binding site
87K, 89T, 105T, 106G, 107R, 108F, 109R, 111K, 122G, 123L, 130F, 131K, 132V, 133N, 134G, 136P, 138K, 139R, 140V, 141N, 143A, 144Y, 169R, 193S, 196K, 197I, 219D, 222R, 223A, 224R, 228S, 229K
CDD
cd13156 (KOW_RPL6)

229K

RNA binding site
87K, 89T, 105T, 106G, 107R, 108F, 109R, 111K, 122G, 123L, 130F, 131K, 132V, 133N, 134G, 136P, 138K, 139R, 140V, 141N, 143A, 144Y, 169R, 193S, 196K, 197I, 219D, 222R, 223A, 224R, 228S, 229K
CDD
cd13156 (KOW_RPL6)

GO term prediction

Biological Process

GO:0006412 translation

Molecular Function

GO:0003735 structural constituent of ribosome

Cellular Component

GO:0005622 intracellular
GO:0005840 ribosome

Filter view on

Entry type

Status

Per-residue features

GBC51028.1

Protein family membership

Domains and repeats

Detailed signature matches

Residue annotation

GO term prediction

Biological Process

Molecular Function

Cellular Component