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Protein

GBC50938.1

Length

190 amino acids

Protein family membership

Ribosomal protein L13 (IPR005822)
- Ribosomal protein L13, bacterial-type (IPR005823)

Domains and repeats

None predicted.

Detailed signature matches

IPR005822

Ribosomal protein L13

cd00392 (Ribosomal_L13)

16 - 129

CDD
cd00392 (Ribosomal_L13)
SSF52161 (Ribosomal...)

12 - 135

SUPERFAMILY
SSF52161 (Ribosomal protein L13)
PIRSF002181 (RPL13p...)

1 - 183

PIRSF
PIRSF002181 (RPL13p_RPL13Aa_RPL16e_RPL13o)
MF_01366 (Ribosomal...)

16 - 147

HAMAP
MF_01366 (Ribosomal_L13)
PF00572 (Ribosomal_L13)

16 - 136

Pfam
PF00572 (Ribosomal_L13)

IPR005823

Ribosomal protein L13, bacterial-type

TIGR01066

9 - 139

TIGRFAMs
TIGR01066 (TIGR01066)

IPR023563

Ribosomal protein L13, conserved site

PS00783 (RIBOSOMAL_L13)

106 - 128

PROSITE patterns
PS00783 (RIBOSOMAL_L13)

no IPR

Unintegrated signatures

Coil

178 - 190

COILS
Coil (Coil)

Residue annotation

23S rRNA interface...

25I

23S rRNA interface
25I, 27G, 28R, 31T, 34A, 38M, 66T, 68K, 96K, 97K, 103R, 104K, 105A, 107S, 108G, 109M, 111P, 112K, 113N, 115L, 117E, 121S, 124Y, 125V
CDD
cd00392 (Ribosomal_L13)

27G

23S rRNA interface
25I, 27G, 28R, 31T, 34A, 38M, 66T, 68K, 96K, 97K, 103R, 104K, 105A, 107S, 108G, 109M, 111P, 112K, 113N, 115L, 117E, 121S, 124Y, 125V
CDD
cd00392 (Ribosomal_L13)

28R

23S rRNA interface
25I, 27G, 28R, 31T, 34A, 38M, 66T, 68K, 96K, 97K, 103R, 104K, 105A, 107S, 108G, 109M, 111P, 112K, 113N, 115L, 117E, 121S, 124Y, 125V
CDD
cd00392 (Ribosomal_L13)

31T

23S rRNA interface
25I, 27G, 28R, 31T, 34A, 38M, 66T, 68K, 96K, 97K, 103R, 104K, 105A, 107S, 108G, 109M, 111P, 112K, 113N, 115L, 117E, 121S, 124Y, 125V
CDD
cd00392 (Ribosomal_L13)

34A

23S rRNA interface
25I, 27G, 28R, 31T, 34A, 38M, 66T, 68K, 96K, 97K, 103R, 104K, 105A, 107S, 108G, 109M, 111P, 112K, 113N, 115L, 117E, 121S, 124Y, 125V
CDD
cd00392 (Ribosomal_L13)

38M

23S rRNA interface
25I, 27G, 28R, 31T, 34A, 38M, 66T, 68K, 96K, 97K, 103R, 104K, 105A, 107S, 108G, 109M, 111P, 112K, 113N, 115L, 117E, 121S, 124Y, 125V
CDD
cd00392 (Ribosomal_L13)

66T

23S rRNA interface
25I, 27G, 28R, 31T, 34A, 38M, 66T, 68K, 96K, 97K, 103R, 104K, 105A, 107S, 108G, 109M, 111P, 112K, 113N, 115L, 117E, 121S, 124Y, 125V
CDD
cd00392 (Ribosomal_L13)

68K

23S rRNA interface
25I, 27G, 28R, 31T, 34A, 38M, 66T, 68K, 96K, 97K, 103R, 104K, 105A, 107S, 108G, 109M, 111P, 112K, 113N, 115L, 117E, 121S, 124Y, 125V
CDD
cd00392 (Ribosomal_L13)

96K

23S rRNA interface
25I, 27G, 28R, 31T, 34A, 38M, 66T, 68K, 96K, 97K, 103R, 104K, 105A, 107S, 108G, 109M, 111P, 112K, 113N, 115L, 117E, 121S, 124Y, 125V
CDD
cd00392 (Ribosomal_L13)

97K

23S rRNA interface
25I, 27G, 28R, 31T, 34A, 38M, 66T, 68K, 96K, 97K, 103R, 104K, 105A, 107S, 108G, 109M, 111P, 112K, 113N, 115L, 117E, 121S, 124Y, 125V
CDD
cd00392 (Ribosomal_L13)

103R

23S rRNA interface
25I, 27G, 28R, 31T, 34A, 38M, 66T, 68K, 96K, 97K, 103R, 104K, 105A, 107S, 108G, 109M, 111P, 112K, 113N, 115L, 117E, 121S, 124Y, 125V
CDD
cd00392 (Ribosomal_L13)

104K

23S rRNA interface
25I, 27G, 28R, 31T, 34A, 38M, 66T, 68K, 96K, 97K, 103R, 104K, 105A, 107S, 108G, 109M, 111P, 112K, 113N, 115L, 117E, 121S, 124Y, 125V
CDD
cd00392 (Ribosomal_L13)

105A

23S rRNA interface
25I, 27G, 28R, 31T, 34A, 38M, 66T, 68K, 96K, 97K, 103R, 104K, 105A, 107S, 108G, 109M, 111P, 112K, 113N, 115L, 117E, 121S, 124Y, 125V
CDD
cd00392 (Ribosomal_L13)

107S

23S rRNA interface
25I, 27G, 28R, 31T, 34A, 38M, 66T, 68K, 96K, 97K, 103R, 104K, 105A, 107S, 108G, 109M, 111P, 112K, 113N, 115L, 117E, 121S, 124Y, 125V
CDD
cd00392 (Ribosomal_L13)

108G

23S rRNA interface
25I, 27G, 28R, 31T, 34A, 38M, 66T, 68K, 96K, 97K, 103R, 104K, 105A, 107S, 108G, 109M, 111P, 112K, 113N, 115L, 117E, 121S, 124Y, 125V
CDD
cd00392 (Ribosomal_L13)

109M

23S rRNA interface
25I, 27G, 28R, 31T, 34A, 38M, 66T, 68K, 96K, 97K, 103R, 104K, 105A, 107S, 108G, 109M, 111P, 112K, 113N, 115L, 117E, 121S, 124Y, 125V
CDD
cd00392 (Ribosomal_L13)

111P

23S rRNA interface
25I, 27G, 28R, 31T, 34A, 38M, 66T, 68K, 96K, 97K, 103R, 104K, 105A, 107S, 108G, 109M, 111P, 112K, 113N, 115L, 117E, 121S, 124Y, 125V
CDD
cd00392 (Ribosomal_L13)

112K

23S rRNA interface
25I, 27G, 28R, 31T, 34A, 38M, 66T, 68K, 96K, 97K, 103R, 104K, 105A, 107S, 108G, 109M, 111P, 112K, 113N, 115L, 117E, 121S, 124Y, 125V
CDD
cd00392 (Ribosomal_L13)

113N

23S rRNA interface
25I, 27G, 28R, 31T, 34A, 38M, 66T, 68K, 96K, 97K, 103R, 104K, 105A, 107S, 108G, 109M, 111P, 112K, 113N, 115L, 117E, 121S, 124Y, 125V
CDD
cd00392 (Ribosomal_L13)

115L

23S rRNA interface
25I, 27G, 28R, 31T, 34A, 38M, 66T, 68K, 96K, 97K, 103R, 104K, 105A, 107S, 108G, 109M, 111P, 112K, 113N, 115L, 117E, 121S, 124Y, 125V
CDD
cd00392 (Ribosomal_L13)

117E

23S rRNA interface
25I, 27G, 28R, 31T, 34A, 38M, 66T, 68K, 96K, 97K, 103R, 104K, 105A, 107S, 108G, 109M, 111P, 112K, 113N, 115L, 117E, 121S, 124Y, 125V
CDD
cd00392 (Ribosomal_L13)

121S

23S rRNA interface
25I, 27G, 28R, 31T, 34A, 38M, 66T, 68K, 96K, 97K, 103R, 104K, 105A, 107S, 108G, 109M, 111P, 112K, 113N, 115L, 117E, 121S, 124Y, 125V
CDD
cd00392 (Ribosomal_L13)

124Y

23S rRNA interface
25I, 27G, 28R, 31T, 34A, 38M, 66T, 68K, 96K, 97K, 103R, 104K, 105A, 107S, 108G, 109M, 111P, 112K, 113N, 115L, 117E, 121S, 124Y, 125V
CDD
cd00392 (Ribosomal_L13)

125V

23S rRNA interface
25I, 27G, 28R, 31T, 34A, 38M, 66T, 68K, 96K, 97K, 103R, 104K, 105A, 107S, 108G, 109M, 111P, 112K, 113N, 115L, 117E, 121S, 124Y, 125V
CDD
cd00392 (Ribosomal_L13)
L3 interface cd00392

97K

L3 interface
97K
CDD
cd00392 (Ribosomal_L13)

GO term prediction

Biological Process

GO:0006412 translation

Molecular Function

GO:0003735 structural constituent of ribosome

Cellular Component

GO:0005840 ribosome

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Entry type

Status

Per-residue features

GBC50938.1

Protein family membership

Domains and repeats

Detailed signature matches

Residue annotation

GO term prediction

Biological Process

Molecular Function

Cellular Component