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Entry type
Status
Per-residue features
Colour by
Protein
GBC50906.1
Length
561 amino acids
Protein family membership
None predicted.
Domains and repeats
-
Domain167 - 346
- Reverse transcriptase domain (IPR000477)
1
100
200
300
400
500
561
Detailed signature matches
no IPR
Unintegrated signatures
-
149 - 169
-
SSF56672 (DNA/RNA p...)111 - 546
-
cd01647 (RT_LTR)171 - 346
-
cd09274 (RNase_HI_R...)440 - 560
-
mobidb-lite (disord...)46 - 85
Residue annotation
-
putative NTP bindi...233D234L235A236S237G238Y267F297D
-
putative active si...233Dputative active site
233D, 234L, 235A, 236S, 237G, 238Y, 267F, 268G, 295Y, 297D, 298D, 342L, 343G
CDD
cd01647 (RT_LTR)234Lputative active site
233D, 234L, 235A, 236S, 237G, 238Y, 267F, 268G, 295Y, 297D, 298D, 342L, 343G
CDD
cd01647 (RT_LTR)235Aputative active site
233D, 234L, 235A, 236S, 237G, 238Y, 267F, 268G, 295Y, 297D, 298D, 342L, 343G
CDD
cd01647 (RT_LTR)236Sputative active site
233D, 234L, 235A, 236S, 237G, 238Y, 267F, 268G, 295Y, 297D, 298D, 342L, 343G
CDD
cd01647 (RT_LTR)237Gputative active site
233D, 234L, 235A, 236S, 237G, 238Y, 267F, 268G, 295Y, 297D, 298D, 342L, 343G
CDD
cd01647 (RT_LTR)238Yputative active site
233D, 234L, 235A, 236S, 237G, 238Y, 267F, 268G, 295Y, 297D, 298D, 342L, 343G
CDD
cd01647 (RT_LTR)267Fputative active site
233D, 234L, 235A, 236S, 237G, 238Y, 267F, 268G, 295Y, 297D, 298D, 342L, 343G
CDD
cd01647 (RT_LTR)268Gputative active site
233D, 234L, 235A, 236S, 237G, 238Y, 267F, 268G, 295Y, 297D, 298D, 342L, 343G
CDD
cd01647 (RT_LTR)295Yputative active site
233D, 234L, 235A, 236S, 237G, 238Y, 267F, 268G, 295Y, 297D, 298D, 342L, 343G
CDD
cd01647 (RT_LTR)297Dputative active site
233D, 234L, 235A, 236S, 237G, 238Y, 267F, 268G, 295Y, 297D, 298D, 342L, 343G
CDD
cd01647 (RT_LTR)298Dputative active site
233D, 234L, 235A, 236S, 237G, 238Y, 267F, 268G, 295Y, 297D, 298D, 342L, 343G
CDD
cd01647 (RT_LTR)342Lputative active site
233D, 234L, 235A, 236S, 237G, 238Y, 267F, 268G, 295Y, 297D, 298D, 342L, 343G
CDD
cd01647 (RT_LTR)343Gputative active site
233D, 234L, 235A, 236S, 237G, 238Y, 267F, 268G, 295Y, 297D, 298D, 342L, 343G
CDD
cd01647 (RT_LTR) -
putative nucleic a...268G
-
active site cd09274
-
RNA/DNA hybrid bin...444DRNA/DNA hybrid binding site
444D, 445A, 446S, 447G, 481P, 482I, 483T, 486E, 511D, 545H, 559R
CDD
cd09274 (RNase_HI_RT_Ty3)445ARNA/DNA hybrid binding site
444D, 445A, 446S, 447G, 481P, 482I, 483T, 486E, 511D, 545H, 559R
CDD
cd09274 (RNase_HI_RT_Ty3)446SRNA/DNA hybrid binding site
444D, 445A, 446S, 447G, 481P, 482I, 483T, 486E, 511D, 545H, 559R
CDD
cd09274 (RNase_HI_RT_Ty3)447GRNA/DNA hybrid binding site
444D, 445A, 446S, 447G, 481P, 482I, 483T, 486E, 511D, 545H, 559R
CDD
cd09274 (RNase_HI_RT_Ty3)481PRNA/DNA hybrid binding site
444D, 445A, 446S, 447G, 481P, 482I, 483T, 486E, 511D, 545H, 559R
CDD
cd09274 (RNase_HI_RT_Ty3)482IRNA/DNA hybrid binding site
444D, 445A, 446S, 447G, 481P, 482I, 483T, 486E, 511D, 545H, 559R
CDD
cd09274 (RNase_HI_RT_Ty3)483TRNA/DNA hybrid binding site
444D, 445A, 446S, 447G, 481P, 482I, 483T, 486E, 511D, 545H, 559R
CDD
cd09274 (RNase_HI_RT_Ty3)486ERNA/DNA hybrid binding site
444D, 445A, 446S, 447G, 481P, 482I, 483T, 486E, 511D, 545H, 559R
CDD
cd09274 (RNase_HI_RT_Ty3)511DRNA/DNA hybrid binding site
444D, 445A, 446S, 447G, 481P, 482I, 483T, 486E, 511D, 545H, 559R
CDD
cd09274 (RNase_HI_RT_Ty3)545HRNA/DNA hybrid binding site
444D, 445A, 446S, 447G, 481P, 482I, 483T, 486E, 511D, 545H, 559R
CDD
cd09274 (RNase_HI_RT_Ty3)559RRNA/DNA hybrid binding site
444D, 445A, 446S, 447G, 481P, 482I, 483T, 486E, 511D, 545H, 559R
CDD
cd09274 (RNase_HI_RT_Ty3)
GO term prediction
Biological Process
None predicted.
Molecular Function
None predicted.
Cellular Component
None predicted.