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Entry type
Status
Per-residue features
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Protein
GBC50467.1
Length
1,574 amino acids
Protein family membership
None predicted.
Domains and repeats
-
Domain1 - 47
- F-box domain (IPR001810)
332 - 636- Reverse transcriptase domain (IPR000477)
1,089 - 1,239- Ribonuclease H-like domain (IPR012337)
- Ribonuclease H domain (IPR002156)
1
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1574
Detailed signature matches
Residue annotation
-
putative NTP bindi...435D436I437S438K439A440F494Q550D
-
putative active si...435Dputative active site
435D, 436I, 437S, 438K, 439A, 440F, 494Q, 495G, 548F, 550D, 551D, 632L, 633G
CDD
cd01650 (RT_nLTR_like)436Iputative active site
435D, 436I, 437S, 438K, 439A, 440F, 494Q, 495G, 548F, 550D, 551D, 632L, 633G
CDD
cd01650 (RT_nLTR_like)437Sputative active site
435D, 436I, 437S, 438K, 439A, 440F, 494Q, 495G, 548F, 550D, 551D, 632L, 633G
CDD
cd01650 (RT_nLTR_like)438Kputative active site
435D, 436I, 437S, 438K, 439A, 440F, 494Q, 495G, 548F, 550D, 551D, 632L, 633G
CDD
cd01650 (RT_nLTR_like)439Aputative active site
435D, 436I, 437S, 438K, 439A, 440F, 494Q, 495G, 548F, 550D, 551D, 632L, 633G
CDD
cd01650 (RT_nLTR_like)440Fputative active site
435D, 436I, 437S, 438K, 439A, 440F, 494Q, 495G, 548F, 550D, 551D, 632L, 633G
CDD
cd01650 (RT_nLTR_like)494Qputative active site
435D, 436I, 437S, 438K, 439A, 440F, 494Q, 495G, 548F, 550D, 551D, 632L, 633G
CDD
cd01650 (RT_nLTR_like)495Gputative active site
435D, 436I, 437S, 438K, 439A, 440F, 494Q, 495G, 548F, 550D, 551D, 632L, 633G
CDD
cd01650 (RT_nLTR_like)548Fputative active site
435D, 436I, 437S, 438K, 439A, 440F, 494Q, 495G, 548F, 550D, 551D, 632L, 633G
CDD
cd01650 (RT_nLTR_like)550Dputative active site
435D, 436I, 437S, 438K, 439A, 440F, 494Q, 495G, 548F, 550D, 551D, 632L, 633G
CDD
cd01650 (RT_nLTR_like)551Dputative active site
435D, 436I, 437S, 438K, 439A, 440F, 494Q, 495G, 548F, 550D, 551D, 632L, 633G
CDD
cd01650 (RT_nLTR_like)632Lputative active site
435D, 436I, 437S, 438K, 439A, 440F, 494Q, 495G, 548F, 550D, 551D, 632L, 633G
CDD
cd01650 (RT_nLTR_like)633Gputative active site
435D, 436I, 437S, 438K, 439A, 440F, 494Q, 495G, 548F, 550D, 551D, 632L, 633G
CDD
cd01650 (RT_nLTR_like) -
putative nucleic a...495G
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0003676 nucleic acid binding
GO:0004523 RNA-DNA hybrid ribonuclease activity
GO:0005515 protein binding
Cellular Component
None predicted.