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Entry type
Status
Per-residue features
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Protein
GBC47807.1
Length
2,466 amino acids
Protein family membership
None predicted.
Domains and repeats
-
Domain650 - 863
- Endonuclease/exonuclease/phosphatase (IPR005135)
1,234 - 1,526- Reverse transcriptase domain (IPR000477)
1
500
1000
1500
2000
2466
Detailed signature matches
no IPR
Unintegrated signatures
-
SSF56672 (DNA/RNA p...)1,179 - 1,564
-
cd01650 (RT_nLTR_like)1,247 - 1,526
-
mobidb-lite (disord...)517 - 557
Residue annotation
-
putative NTP bindi...1,339Dputative NTP binding site
1,339D, 1,340I, 1,341S, 1,342K, 1,343A, 1,344Y, 1,398Q, 1,456D
CDD
cd01650 (RT_nLTR_like)1,340Iputative NTP binding site
1,339D, 1,340I, 1,341S, 1,342K, 1,343A, 1,344Y, 1,398Q, 1,456D
CDD
cd01650 (RT_nLTR_like)1,341Sputative NTP binding site
1,339D, 1,340I, 1,341S, 1,342K, 1,343A, 1,344Y, 1,398Q, 1,456D
CDD
cd01650 (RT_nLTR_like)1,342Kputative NTP binding site
1,339D, 1,340I, 1,341S, 1,342K, 1,343A, 1,344Y, 1,398Q, 1,456D
CDD
cd01650 (RT_nLTR_like)1,343Aputative NTP binding site
1,339D, 1,340I, 1,341S, 1,342K, 1,343A, 1,344Y, 1,398Q, 1,456D
CDD
cd01650 (RT_nLTR_like)1,344Yputative NTP binding site
1,339D, 1,340I, 1,341S, 1,342K, 1,343A, 1,344Y, 1,398Q, 1,456D
CDD
cd01650 (RT_nLTR_like)1,398Qputative NTP binding site
1,339D, 1,340I, 1,341S, 1,342K, 1,343A, 1,344Y, 1,398Q, 1,456D
CDD
cd01650 (RT_nLTR_like)1,456Dputative NTP binding site
1,339D, 1,340I, 1,341S, 1,342K, 1,343A, 1,344Y, 1,398Q, 1,456D
CDD
cd01650 (RT_nLTR_like) -
putative active si...1,339Dputative active site
1,339D, 1,340I, 1,341S, 1,342K, 1,343A, 1,344Y, 1,398Q, 1,399G, 1,454F, 1,456D, 1,457D, 1,522L, 1,523G
CDD
cd01650 (RT_nLTR_like)1,340Iputative active site
1,339D, 1,340I, 1,341S, 1,342K, 1,343A, 1,344Y, 1,398Q, 1,399G, 1,454F, 1,456D, 1,457D, 1,522L, 1,523G
CDD
cd01650 (RT_nLTR_like)1,341Sputative active site
1,339D, 1,340I, 1,341S, 1,342K, 1,343A, 1,344Y, 1,398Q, 1,399G, 1,454F, 1,456D, 1,457D, 1,522L, 1,523G
CDD
cd01650 (RT_nLTR_like)1,342Kputative active site
1,339D, 1,340I, 1,341S, 1,342K, 1,343A, 1,344Y, 1,398Q, 1,399G, 1,454F, 1,456D, 1,457D, 1,522L, 1,523G
CDD
cd01650 (RT_nLTR_like)1,343Aputative active site
1,339D, 1,340I, 1,341S, 1,342K, 1,343A, 1,344Y, 1,398Q, 1,399G, 1,454F, 1,456D, 1,457D, 1,522L, 1,523G
CDD
cd01650 (RT_nLTR_like)1,344Yputative active site
1,339D, 1,340I, 1,341S, 1,342K, 1,343A, 1,344Y, 1,398Q, 1,399G, 1,454F, 1,456D, 1,457D, 1,522L, 1,523G
CDD
cd01650 (RT_nLTR_like)1,398Qputative active site
1,339D, 1,340I, 1,341S, 1,342K, 1,343A, 1,344Y, 1,398Q, 1,399G, 1,454F, 1,456D, 1,457D, 1,522L, 1,523G
CDD
cd01650 (RT_nLTR_like)1,399Gputative active site
1,339D, 1,340I, 1,341S, 1,342K, 1,343A, 1,344Y, 1,398Q, 1,399G, 1,454F, 1,456D, 1,457D, 1,522L, 1,523G
CDD
cd01650 (RT_nLTR_like)1,454Fputative active site
1,339D, 1,340I, 1,341S, 1,342K, 1,343A, 1,344Y, 1,398Q, 1,399G, 1,454F, 1,456D, 1,457D, 1,522L, 1,523G
CDD
cd01650 (RT_nLTR_like)1,456Dputative active site
1,339D, 1,340I, 1,341S, 1,342K, 1,343A, 1,344Y, 1,398Q, 1,399G, 1,454F, 1,456D, 1,457D, 1,522L, 1,523G
CDD
cd01650 (RT_nLTR_like)1,457Dputative active site
1,339D, 1,340I, 1,341S, 1,342K, 1,343A, 1,344Y, 1,398Q, 1,399G, 1,454F, 1,456D, 1,457D, 1,522L, 1,523G
CDD
cd01650 (RT_nLTR_like)1,522Lputative active site
1,339D, 1,340I, 1,341S, 1,342K, 1,343A, 1,344Y, 1,398Q, 1,399G, 1,454F, 1,456D, 1,457D, 1,522L, 1,523G
CDD
cd01650 (RT_nLTR_like)1,523Gputative active site
1,339D, 1,340I, 1,341S, 1,342K, 1,343A, 1,344Y, 1,398Q, 1,399G, 1,454F, 1,456D, 1,457D, 1,522L, 1,523G
CDD
cd01650 (RT_nLTR_like) -
putative nucleic a...1,399G
GO term prediction
Biological Process
None predicted.
Molecular Function
None predicted.
Cellular Component
None predicted.