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Entry type
Status
Per-residue features
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Protein
GBC46765.1
Length
2,216 amino acids
Protein family membership
None predicted.
Domains and repeats
-
Domain50 - 196
- RNA recognition motif domain (IPR000504)
220 - 236- Zinc finger, CCHC-type (IPR001878)
474 - 687- Endonuclease/exonuclease/phosphatase (IPR005135)
1,021 - 1,321- Reverse transcriptase domain (IPR000477)
1,771 - 1,919- Ribonuclease H-like domain (IPR012337)
- Ribonuclease H domain (IPR002156)
1
500
1000
1500
2216
Detailed signature matches
no IPR
Unintegrated signatures
-
cd01650 (RT_nLTR_like)1,034 - 1,321
-
mobidb-lite (disord...)30 - 49363 - 401262 - 307
Residue annotation
-
putative NTP bindi...1,124Dputative NTP binding site
1,124D, 1,125M, 1,126G, 1,127K, 1,128A, 1,129Y, 1,183Q, 1,238D
CDD
cd01650 (RT_nLTR_like)1,125Mputative NTP binding site
1,124D, 1,125M, 1,126G, 1,127K, 1,128A, 1,129Y, 1,183Q, 1,238D
CDD
cd01650 (RT_nLTR_like)1,126Gputative NTP binding site
1,124D, 1,125M, 1,126G, 1,127K, 1,128A, 1,129Y, 1,183Q, 1,238D
CDD
cd01650 (RT_nLTR_like)1,127Kputative NTP binding site
1,124D, 1,125M, 1,126G, 1,127K, 1,128A, 1,129Y, 1,183Q, 1,238D
CDD
cd01650 (RT_nLTR_like)1,128Aputative NTP binding site
1,124D, 1,125M, 1,126G, 1,127K, 1,128A, 1,129Y, 1,183Q, 1,238D
CDD
cd01650 (RT_nLTR_like)1,129Yputative NTP binding site
1,124D, 1,125M, 1,126G, 1,127K, 1,128A, 1,129Y, 1,183Q, 1,238D
CDD
cd01650 (RT_nLTR_like)1,183Qputative NTP binding site
1,124D, 1,125M, 1,126G, 1,127K, 1,128A, 1,129Y, 1,183Q, 1,238D
CDD
cd01650 (RT_nLTR_like)1,238Dputative NTP binding site
1,124D, 1,125M, 1,126G, 1,127K, 1,128A, 1,129Y, 1,183Q, 1,238D
CDD
cd01650 (RT_nLTR_like) -
putative active si...1,124Dputative active site
1,124D, 1,125M, 1,126G, 1,127K, 1,128A, 1,129Y, 1,183Q, 1,184G, 1,236Y, 1,238D, 1,239D, 1,317L, 1,318G
CDD
cd01650 (RT_nLTR_like)1,125Mputative active site
1,124D, 1,125M, 1,126G, 1,127K, 1,128A, 1,129Y, 1,183Q, 1,184G, 1,236Y, 1,238D, 1,239D, 1,317L, 1,318G
CDD
cd01650 (RT_nLTR_like)1,126Gputative active site
1,124D, 1,125M, 1,126G, 1,127K, 1,128A, 1,129Y, 1,183Q, 1,184G, 1,236Y, 1,238D, 1,239D, 1,317L, 1,318G
CDD
cd01650 (RT_nLTR_like)1,127Kputative active site
1,124D, 1,125M, 1,126G, 1,127K, 1,128A, 1,129Y, 1,183Q, 1,184G, 1,236Y, 1,238D, 1,239D, 1,317L, 1,318G
CDD
cd01650 (RT_nLTR_like)1,128Aputative active site
1,124D, 1,125M, 1,126G, 1,127K, 1,128A, 1,129Y, 1,183Q, 1,184G, 1,236Y, 1,238D, 1,239D, 1,317L, 1,318G
CDD
cd01650 (RT_nLTR_like)1,129Yputative active site
1,124D, 1,125M, 1,126G, 1,127K, 1,128A, 1,129Y, 1,183Q, 1,184G, 1,236Y, 1,238D, 1,239D, 1,317L, 1,318G
CDD
cd01650 (RT_nLTR_like)1,183Qputative active site
1,124D, 1,125M, 1,126G, 1,127K, 1,128A, 1,129Y, 1,183Q, 1,184G, 1,236Y, 1,238D, 1,239D, 1,317L, 1,318G
CDD
cd01650 (RT_nLTR_like)1,184Gputative active site
1,124D, 1,125M, 1,126G, 1,127K, 1,128A, 1,129Y, 1,183Q, 1,184G, 1,236Y, 1,238D, 1,239D, 1,317L, 1,318G
CDD
cd01650 (RT_nLTR_like)1,236Yputative active site
1,124D, 1,125M, 1,126G, 1,127K, 1,128A, 1,129Y, 1,183Q, 1,184G, 1,236Y, 1,238D, 1,239D, 1,317L, 1,318G
CDD
cd01650 (RT_nLTR_like)1,238Dputative active site
1,124D, 1,125M, 1,126G, 1,127K, 1,128A, 1,129Y, 1,183Q, 1,184G, 1,236Y, 1,238D, 1,239D, 1,317L, 1,318G
CDD
cd01650 (RT_nLTR_like)1,239Dputative active site
1,124D, 1,125M, 1,126G, 1,127K, 1,128A, 1,129Y, 1,183Q, 1,184G, 1,236Y, 1,238D, 1,239D, 1,317L, 1,318G
CDD
cd01650 (RT_nLTR_like)1,317Lputative active site
1,124D, 1,125M, 1,126G, 1,127K, 1,128A, 1,129Y, 1,183Q, 1,184G, 1,236Y, 1,238D, 1,239D, 1,317L, 1,318G
CDD
cd01650 (RT_nLTR_like)1,318Gputative active site
1,124D, 1,125M, 1,126G, 1,127K, 1,128A, 1,129Y, 1,183Q, 1,184G, 1,236Y, 1,238D, 1,239D, 1,317L, 1,318G
CDD
cd01650 (RT_nLTR_like) -
putative nucleic a...1,184G
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0003676 nucleic acid binding
GO:0004523 RNA-DNA hybrid ribonuclease activity
GO:0008270 zinc ion binding
GO:0046872 metal ion binding
Cellular Component
None predicted.