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Entry type
Status
Per-residue features
Colour by
Protein
GBC42650.1
Length
561 amino acids
Protein family membership
None predicted.
Domains and repeats
-
Domain65 - 172
- Splicing factor 1, helix-hairpin domain (IPR032570)
292 - 344- Zinc finger, CCHC-type (IPR001878)
-
Domain175 - 297
- K Homology domain (IPR004087)
- K Homology domain, type 1 (IPR004088)
- K Homology domain (IPR004087)
1
100
200
300
400
500
561
Detailed signature matches

Unintegrated signatures
-
PS50084 (KH_TYPE_1)192 - 262
-
cd02395 (SF1_like-KH)178 - 295
-
mobidb-lite (disord...)521 - 561114 - 1331 - 74373 - 492
Residue annotation
-
RNA binding site c...191IRNA binding site
191I, 192N, 194I, 195G, 196L, 198I, 199G, 200P, 201R, 202G, 205L, 216I, 217S, 218I, 219R, 220G, 223S, 224V, 225K, 281R, 284L, 285R, 287L, 288A, 292G, 293T, 294L, 295R
CDD
cd02395 (SF1_like-KH)192NRNA binding site
191I, 192N, 194I, 195G, 196L, 198I, 199G, 200P, 201R, 202G, 205L, 216I, 217S, 218I, 219R, 220G, 223S, 224V, 225K, 281R, 284L, 285R, 287L, 288A, 292G, 293T, 294L, 295R
CDD
cd02395 (SF1_like-KH)194IRNA binding site
191I, 192N, 194I, 195G, 196L, 198I, 199G, 200P, 201R, 202G, 205L, 216I, 217S, 218I, 219R, 220G, 223S, 224V, 225K, 281R, 284L, 285R, 287L, 288A, 292G, 293T, 294L, 295R
CDD
cd02395 (SF1_like-KH)195GRNA binding site
191I, 192N, 194I, 195G, 196L, 198I, 199G, 200P, 201R, 202G, 205L, 216I, 217S, 218I, 219R, 220G, 223S, 224V, 225K, 281R, 284L, 285R, 287L, 288A, 292G, 293T, 294L, 295R
CDD
cd02395 (SF1_like-KH)196LRNA binding site
191I, 192N, 194I, 195G, 196L, 198I, 199G, 200P, 201R, 202G, 205L, 216I, 217S, 218I, 219R, 220G, 223S, 224V, 225K, 281R, 284L, 285R, 287L, 288A, 292G, 293T, 294L, 295R
CDD
cd02395 (SF1_like-KH)198IRNA binding site
191I, 192N, 194I, 195G, 196L, 198I, 199G, 200P, 201R, 202G, 205L, 216I, 217S, 218I, 219R, 220G, 223S, 224V, 225K, 281R, 284L, 285R, 287L, 288A, 292G, 293T, 294L, 295R
CDD
cd02395 (SF1_like-KH)199GRNA binding site
191I, 192N, 194I, 195G, 196L, 198I, 199G, 200P, 201R, 202G, 205L, 216I, 217S, 218I, 219R, 220G, 223S, 224V, 225K, 281R, 284L, 285R, 287L, 288A, 292G, 293T, 294L, 295R
CDD
cd02395 (SF1_like-KH)200PRNA binding site
191I, 192N, 194I, 195G, 196L, 198I, 199G, 200P, 201R, 202G, 205L, 216I, 217S, 218I, 219R, 220G, 223S, 224V, 225K, 281R, 284L, 285R, 287L, 288A, 292G, 293T, 294L, 295R
CDD
cd02395 (SF1_like-KH)201RRNA binding site
191I, 192N, 194I, 195G, 196L, 198I, 199G, 200P, 201R, 202G, 205L, 216I, 217S, 218I, 219R, 220G, 223S, 224V, 225K, 281R, 284L, 285R, 287L, 288A, 292G, 293T, 294L, 295R
CDD
cd02395 (SF1_like-KH)202GRNA binding site
191I, 192N, 194I, 195G, 196L, 198I, 199G, 200P, 201R, 202G, 205L, 216I, 217S, 218I, 219R, 220G, 223S, 224V, 225K, 281R, 284L, 285R, 287L, 288A, 292G, 293T, 294L, 295R
CDD
cd02395 (SF1_like-KH)205LRNA binding site
191I, 192N, 194I, 195G, 196L, 198I, 199G, 200P, 201R, 202G, 205L, 216I, 217S, 218I, 219R, 220G, 223S, 224V, 225K, 281R, 284L, 285R, 287L, 288A, 292G, 293T, 294L, 295R
CDD
cd02395 (SF1_like-KH)216IRNA binding site
191I, 192N, 194I, 195G, 196L, 198I, 199G, 200P, 201R, 202G, 205L, 216I, 217S, 218I, 219R, 220G, 223S, 224V, 225K, 281R, 284L, 285R, 287L, 288A, 292G, 293T, 294L, 295R
CDD
cd02395 (SF1_like-KH)217SRNA binding site
191I, 192N, 194I, 195G, 196L, 198I, 199G, 200P, 201R, 202G, 205L, 216I, 217S, 218I, 219R, 220G, 223S, 224V, 225K, 281R, 284L, 285R, 287L, 288A, 292G, 293T, 294L, 295R
CDD
cd02395 (SF1_like-KH)218IRNA binding site
191I, 192N, 194I, 195G, 196L, 198I, 199G, 200P, 201R, 202G, 205L, 216I, 217S, 218I, 219R, 220G, 223S, 224V, 225K, 281R, 284L, 285R, 287L, 288A, 292G, 293T, 294L, 295R
CDD
cd02395 (SF1_like-KH)219RRNA binding site
191I, 192N, 194I, 195G, 196L, 198I, 199G, 200P, 201R, 202G, 205L, 216I, 217S, 218I, 219R, 220G, 223S, 224V, 225K, 281R, 284L, 285R, 287L, 288A, 292G, 293T, 294L, 295R
CDD
cd02395 (SF1_like-KH)220GRNA binding site
191I, 192N, 194I, 195G, 196L, 198I, 199G, 200P, 201R, 202G, 205L, 216I, 217S, 218I, 219R, 220G, 223S, 224V, 225K, 281R, 284L, 285R, 287L, 288A, 292G, 293T, 294L, 295R
CDD
cd02395 (SF1_like-KH)223SRNA binding site
191I, 192N, 194I, 195G, 196L, 198I, 199G, 200P, 201R, 202G, 205L, 216I, 217S, 218I, 219R, 220G, 223S, 224V, 225K, 281R, 284L, 285R, 287L, 288A, 292G, 293T, 294L, 295R
CDD
cd02395 (SF1_like-KH)224VRNA binding site
191I, 192N, 194I, 195G, 196L, 198I, 199G, 200P, 201R, 202G, 205L, 216I, 217S, 218I, 219R, 220G, 223S, 224V, 225K, 281R, 284L, 285R, 287L, 288A, 292G, 293T, 294L, 295R
CDD
cd02395 (SF1_like-KH)225KRNA binding site
191I, 192N, 194I, 195G, 196L, 198I, 199G, 200P, 201R, 202G, 205L, 216I, 217S, 218I, 219R, 220G, 223S, 224V, 225K, 281R, 284L, 285R, 287L, 288A, 292G, 293T, 294L, 295R
CDD
cd02395 (SF1_like-KH)281RRNA binding site
191I, 192N, 194I, 195G, 196L, 198I, 199G, 200P, 201R, 202G, 205L, 216I, 217S, 218I, 219R, 220G, 223S, 224V, 225K, 281R, 284L, 285R, 287L, 288A, 292G, 293T, 294L, 295R
CDD
cd02395 (SF1_like-KH)284LRNA binding site
191I, 192N, 194I, 195G, 196L, 198I, 199G, 200P, 201R, 202G, 205L, 216I, 217S, 218I, 219R, 220G, 223S, 224V, 225K, 281R, 284L, 285R, 287L, 288A, 292G, 293T, 294L, 295R
CDD
cd02395 (SF1_like-KH)285RRNA binding site
191I, 192N, 194I, 195G, 196L, 198I, 199G, 200P, 201R, 202G, 205L, 216I, 217S, 218I, 219R, 220G, 223S, 224V, 225K, 281R, 284L, 285R, 287L, 288A, 292G, 293T, 294L, 295R
CDD
cd02395 (SF1_like-KH)287LRNA binding site
191I, 192N, 194I, 195G, 196L, 198I, 199G, 200P, 201R, 202G, 205L, 216I, 217S, 218I, 219R, 220G, 223S, 224V, 225K, 281R, 284L, 285R, 287L, 288A, 292G, 293T, 294L, 295R
CDD
cd02395 (SF1_like-KH)288ARNA binding site
191I, 192N, 194I, 195G, 196L, 198I, 199G, 200P, 201R, 202G, 205L, 216I, 217S, 218I, 219R, 220G, 223S, 224V, 225K, 281R, 284L, 285R, 287L, 288A, 292G, 293T, 294L, 295R
CDD
cd02395 (SF1_like-KH)292GRNA binding site
191I, 192N, 194I, 195G, 196L, 198I, 199G, 200P, 201R, 202G, 205L, 216I, 217S, 218I, 219R, 220G, 223S, 224V, 225K, 281R, 284L, 285R, 287L, 288A, 292G, 293T, 294L, 295R
CDD
cd02395 (SF1_like-KH)293TRNA binding site
191I, 192N, 194I, 195G, 196L, 198I, 199G, 200P, 201R, 202G, 205L, 216I, 217S, 218I, 219R, 220G, 223S, 224V, 225K, 281R, 284L, 285R, 287L, 288A, 292G, 293T, 294L, 295R
CDD
cd02395 (SF1_like-KH)294LRNA binding site
191I, 192N, 194I, 195G, 196L, 198I, 199G, 200P, 201R, 202G, 205L, 216I, 217S, 218I, 219R, 220G, 223S, 224V, 225K, 281R, 284L, 285R, 287L, 288A, 292G, 293T, 294L, 295R
CDD
cd02395 (SF1_like-KH)295RRNA binding site
191I, 192N, 194I, 195G, 196L, 198I, 199G, 200P, 201R, 202G, 205L, 216I, 217S, 218I, 219R, 220G, 223S, 224V, 225K, 281R, 284L, 285R, 287L, 288A, 292G, 293T, 294L, 295R
CDD
cd02395 (SF1_like-KH) -
G-X-X-G motif cd02...
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0003676 nucleic acid binding
GO:0003723 RNA binding
GO:0008270 zinc ion binding
Cellular Component
None predicted.