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Entry type
Status
Per-residue features
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Protein
GBC42248.1
Length
1,788 amino acids
Protein family membership
None predicted.
Domains and repeats
-
Domain6 - 236
- Endonuclease/exonuclease/phosphatase (IPR005135)
578 - 880- Reverse transcriptase domain (IPR000477)
1,341 - 1,456- Ribonuclease H-like domain (IPR012337)
- Ribonuclease H domain (IPR002156)
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1788
Detailed signature matches
Residue annotation
-
putative NTP bindi...681D682I683S684K685A686F740Q794D
-
putative active si...681Dputative active site
681D, 682I, 683S, 684K, 685A, 686F, 740Q, 741G, 792F, 794D, 795D, 876L, 877G
CDD
cd01650 (RT_nLTR_like)682Iputative active site
681D, 682I, 683S, 684K, 685A, 686F, 740Q, 741G, 792F, 794D, 795D, 876L, 877G
CDD
cd01650 (RT_nLTR_like)683Sputative active site
681D, 682I, 683S, 684K, 685A, 686F, 740Q, 741G, 792F, 794D, 795D, 876L, 877G
CDD
cd01650 (RT_nLTR_like)684Kputative active site
681D, 682I, 683S, 684K, 685A, 686F, 740Q, 741G, 792F, 794D, 795D, 876L, 877G
CDD
cd01650 (RT_nLTR_like)685Aputative active site
681D, 682I, 683S, 684K, 685A, 686F, 740Q, 741G, 792F, 794D, 795D, 876L, 877G
CDD
cd01650 (RT_nLTR_like)686Fputative active site
681D, 682I, 683S, 684K, 685A, 686F, 740Q, 741G, 792F, 794D, 795D, 876L, 877G
CDD
cd01650 (RT_nLTR_like)740Qputative active site
681D, 682I, 683S, 684K, 685A, 686F, 740Q, 741G, 792F, 794D, 795D, 876L, 877G
CDD
cd01650 (RT_nLTR_like)741Gputative active site
681D, 682I, 683S, 684K, 685A, 686F, 740Q, 741G, 792F, 794D, 795D, 876L, 877G
CDD
cd01650 (RT_nLTR_like)792Fputative active site
681D, 682I, 683S, 684K, 685A, 686F, 740Q, 741G, 792F, 794D, 795D, 876L, 877G
CDD
cd01650 (RT_nLTR_like)794Dputative active site
681D, 682I, 683S, 684K, 685A, 686F, 740Q, 741G, 792F, 794D, 795D, 876L, 877G
CDD
cd01650 (RT_nLTR_like)795Dputative active site
681D, 682I, 683S, 684K, 685A, 686F, 740Q, 741G, 792F, 794D, 795D, 876L, 877G
CDD
cd01650 (RT_nLTR_like)876Lputative active site
681D, 682I, 683S, 684K, 685A, 686F, 740Q, 741G, 792F, 794D, 795D, 876L, 877G
CDD
cd01650 (RT_nLTR_like)877Gputative active site
681D, 682I, 683S, 684K, 685A, 686F, 740Q, 741G, 792F, 794D, 795D, 876L, 877G
CDD
cd01650 (RT_nLTR_like) -
putative nucleic a...741G
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0003676 nucleic acid binding
GO:0004523 RNA-DNA hybrid ribonuclease activity
Cellular Component
None predicted.