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Entry type
Status
Per-residue features
Colour by
Protein
GBC41046.1
Length
619 amino acids
Protein family membership
- Replication factor A protein 1 (IPR004591)
Domains and repeats
-
Domain
-
Domain
1
100
200
300
400
500
619
Detailed signature matches

Unintegrated signatures
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cd04474 (RPA1_DBD_A)
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cd04475 (RPA1_DBD_B)
-
cd04476 (RPA1_DBD_C)
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mobidb-lite (disord...)
Residue annotation
-
generic binding su...
-
DBD-A/DBD-B interf...
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ssDNA binding site...240TssDNA binding site
214K, 238R, 240T, 242F, 245Q, 267N, 273F, 281E, 283T, 284I
CDD
cd04474 (RPA1_DBD_A)242FssDNA binding site
214K, 238R, 240T, 242F, 245Q, 267N, 273F, 281E, 283T, 284I
CDD
cd04474 (RPA1_DBD_A)245QssDNA binding site
214K, 238R, 240T, 242F, 245Q, 267N, 273F, 281E, 283T, 284I
CDD
cd04474 (RPA1_DBD_A)267NssDNA binding site
214K, 238R, 240T, 242F, 245Q, 267N, 273F, 281E, 283T, 284I
CDD
cd04474 (RPA1_DBD_A)273FssDNA binding site
214K, 238R, 240T, 242F, 245Q, 267N, 273F, 281E, 283T, 284I
CDD
cd04474 (RPA1_DBD_A)281EssDNA binding site
214K, 238R, 240T, 242F, 245Q, 267N, 273F, 281E, 283T, 284I
CDD
cd04474 (RPA1_DBD_A)283TssDNA binding site
214K, 238R, 240T, 242F, 245Q, 267N, 273F, 281E, 283T, 284I
CDD
cd04474 (RPA1_DBD_A)284IssDNA binding site
214K, 238R, 240T, 242F, 245Q, 267N, 273F, 281E, 283T, 284I
CDD
cd04474 (RPA1_DBD_A) -
DBD-B/DBD-A interf...322D383K400T401S402K
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ssDNA binding site...362T364W386R390F396S400T
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generic binding su...466V572T574I576K598I
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generic binding su...471Vgeneric binding surface I
471V, 472V, 473F, 520G, 521M, 522N, 523I, 525D, 531W, 532F, 533Q, 535F, 571K, 578R, 579A, 580K, 591K, 592Y, 593Q
CDD
cd04476 (RPA1_DBD_C)472Vgeneric binding surface I
471V, 472V, 473F, 520G, 521M, 522N, 523I, 525D, 531W, 532F, 533Q, 535F, 571K, 578R, 579A, 580K, 591K, 592Y, 593Q
CDD
cd04476 (RPA1_DBD_C)473Fgeneric binding surface I
471V, 472V, 473F, 520G, 521M, 522N, 523I, 525D, 531W, 532F, 533Q, 535F, 571K, 578R, 579A, 580K, 591K, 592Y, 593Q
CDD
cd04476 (RPA1_DBD_C)520Ggeneric binding surface I
471V, 472V, 473F, 520G, 521M, 522N, 523I, 525D, 531W, 532F, 533Q, 535F, 571K, 578R, 579A, 580K, 591K, 592Y, 593Q
CDD
cd04476 (RPA1_DBD_C)521Mgeneric binding surface I
471V, 472V, 473F, 520G, 521M, 522N, 523I, 525D, 531W, 532F, 533Q, 535F, 571K, 578R, 579A, 580K, 591K, 592Y, 593Q
CDD
cd04476 (RPA1_DBD_C)522Ngeneric binding surface I
471V, 472V, 473F, 520G, 521M, 522N, 523I, 525D, 531W, 532F, 533Q, 535F, 571K, 578R, 579A, 580K, 591K, 592Y, 593Q
CDD
cd04476 (RPA1_DBD_C)523Igeneric binding surface I
471V, 472V, 473F, 520G, 521M, 522N, 523I, 525D, 531W, 532F, 533Q, 535F, 571K, 578R, 579A, 580K, 591K, 592Y, 593Q
CDD
cd04476 (RPA1_DBD_C)525Dgeneric binding surface I
471V, 472V, 473F, 520G, 521M, 522N, 523I, 525D, 531W, 532F, 533Q, 535F, 571K, 578R, 579A, 580K, 591K, 592Y, 593Q
CDD
cd04476 (RPA1_DBD_C)531Wgeneric binding surface I
471V, 472V, 473F, 520G, 521M, 522N, 523I, 525D, 531W, 532F, 533Q, 535F, 571K, 578R, 579A, 580K, 591K, 592Y, 593Q
CDD
cd04476 (RPA1_DBD_C)532Fgeneric binding surface I
471V, 472V, 473F, 520G, 521M, 522N, 523I, 525D, 531W, 532F, 533Q, 535F, 571K, 578R, 579A, 580K, 591K, 592Y, 593Q
CDD
cd04476 (RPA1_DBD_C)533Qgeneric binding surface I
471V, 472V, 473F, 520G, 521M, 522N, 523I, 525D, 531W, 532F, 533Q, 535F, 571K, 578R, 579A, 580K, 591K, 592Y, 593Q
CDD
cd04476 (RPA1_DBD_C)535Fgeneric binding surface I
471V, 472V, 473F, 520G, 521M, 522N, 523I, 525D, 531W, 532F, 533Q, 535F, 571K, 578R, 579A, 580K, 591K, 592Y, 593Q
CDD
cd04476 (RPA1_DBD_C)571Kgeneric binding surface I
471V, 472V, 473F, 520G, 521M, 522N, 523I, 525D, 531W, 532F, 533Q, 535F, 571K, 578R, 579A, 580K, 591K, 592Y, 593Q
CDD
cd04476 (RPA1_DBD_C)578Rgeneric binding surface I
471V, 472V, 473F, 520G, 521M, 522N, 523I, 525D, 531W, 532F, 533Q, 535F, 571K, 578R, 579A, 580K, 591K, 592Y, 593Q
CDD
cd04476 (RPA1_DBD_C)579Ageneric binding surface I
471V, 472V, 473F, 520G, 521M, 522N, 523I, 525D, 531W, 532F, 533Q, 535F, 571K, 578R, 579A, 580K, 591K, 592Y, 593Q
CDD
cd04476 (RPA1_DBD_C)580Kgeneric binding surface I
471V, 472V, 473F, 520G, 521M, 522N, 523I, 525D, 531W, 532F, 533Q, 535F, 571K, 578R, 579A, 580K, 591K, 592Y, 593Q
CDD
cd04476 (RPA1_DBD_C)591Kgeneric binding surface I
471V, 472V, 473F, 520G, 521M, 522N, 523I, 525D, 531W, 532F, 533Q, 535F, 571K, 578R, 579A, 580K, 591K, 592Y, 593Q
CDD
cd04476 (RPA1_DBD_C)592Ygeneric binding surface I
471V, 472V, 473F, 520G, 521M, 522N, 523I, 525D, 531W, 532F, 533Q, 535F, 571K, 578R, 579A, 580K, 591K, 592Y, 593Q
CDD
cd04476 (RPA1_DBD_C)593Qgeneric binding surface I
471V, 472V, 473F, 520G, 521M, 522N, 523I, 525D, 531W, 532F, 533Q, 535F, 571K, 578R, 579A, 580K, 591K, 592Y, 593Q
CDD
cd04476 (RPA1_DBD_C) -
RPA1 DBD-C/RPA2 DB...472VRPA1 DBD-C/RPA2 DBD-D interface
472V, 525D, 526H, 566D, 567S, 569Y, 570F, 571K, 609L, 613I
CDD
cd04476 (RPA1_DBD_C)525DRPA1 DBD-C/RPA2 DBD-D interface
472V, 525D, 526H, 566D, 567S, 569Y, 570F, 571K, 609L, 613I
CDD
cd04476 (RPA1_DBD_C)526HRPA1 DBD-C/RPA2 DBD-D interface
472V, 525D, 526H, 566D, 567S, 569Y, 570F, 571K, 609L, 613I
CDD
cd04476 (RPA1_DBD_C)566DRPA1 DBD-C/RPA2 DBD-D interface
472V, 525D, 526H, 566D, 567S, 569Y, 570F, 571K, 609L, 613I
CDD
cd04476 (RPA1_DBD_C)567SRPA1 DBD-C/RPA2 DBD-D interface
472V, 525D, 526H, 566D, 567S, 569Y, 570F, 571K, 609L, 613I
CDD
cd04476 (RPA1_DBD_C)569YRPA1 DBD-C/RPA2 DBD-D interface
472V, 525D, 526H, 566D, 567S, 569Y, 570F, 571K, 609L, 613I
CDD
cd04476 (RPA1_DBD_C)570FRPA1 DBD-C/RPA2 DBD-D interface
472V, 525D, 526H, 566D, 567S, 569Y, 570F, 571K, 609L, 613I
CDD
cd04476 (RPA1_DBD_C)571KRPA1 DBD-C/RPA2 DBD-D interface
472V, 525D, 526H, 566D, 567S, 569Y, 570F, 571K, 609L, 613I
CDD
cd04476 (RPA1_DBD_C)609LRPA1 DBD-C/RPA2 DBD-D interface
472V, 525D, 526H, 566D, 567S, 569Y, 570F, 571K, 609L, 613I
CDD
cd04476 (RPA1_DBD_C)613IRPA1 DBD-C/RPA2 DBD-D interface
472V, 525D, 526H, 566D, 567S, 569Y, 570F, 571K, 609L, 613I
CDD
cd04476 (RPA1_DBD_C) -
trimerization core...472Vtrimerization core interface
472V, 525D, 526H, 566D, 567S, 569Y, 570F, 571K, 607K, 609L, 613I, 614K
CDD
cd04476 (RPA1_DBD_C)525Dtrimerization core interface
472V, 525D, 526H, 566D, 567S, 569Y, 570F, 571K, 607K, 609L, 613I, 614K
CDD
cd04476 (RPA1_DBD_C)526Htrimerization core interface
472V, 525D, 526H, 566D, 567S, 569Y, 570F, 571K, 607K, 609L, 613I, 614K
CDD
cd04476 (RPA1_DBD_C)566Dtrimerization core interface
472V, 525D, 526H, 566D, 567S, 569Y, 570F, 571K, 607K, 609L, 613I, 614K
CDD
cd04476 (RPA1_DBD_C)567Strimerization core interface
472V, 525D, 526H, 566D, 567S, 569Y, 570F, 571K, 607K, 609L, 613I, 614K
CDD
cd04476 (RPA1_DBD_C)569Ytrimerization core interface
472V, 525D, 526H, 566D, 567S, 569Y, 570F, 571K, 607K, 609L, 613I, 614K
CDD
cd04476 (RPA1_DBD_C)570Ftrimerization core interface
472V, 525D, 526H, 566D, 567S, 569Y, 570F, 571K, 607K, 609L, 613I, 614K
CDD
cd04476 (RPA1_DBD_C)571Ktrimerization core interface
472V, 525D, 526H, 566D, 567S, 569Y, 570F, 571K, 607K, 609L, 613I, 614K
CDD
cd04476 (RPA1_DBD_C)607Ktrimerization core interface
472V, 525D, 526H, 566D, 567S, 569Y, 570F, 571K, 607K, 609L, 613I, 614K
CDD
cd04476 (RPA1_DBD_C)609Ltrimerization core interface
472V, 525D, 526H, 566D, 567S, 569Y, 570F, 571K, 607K, 609L, 613I, 614K
CDD
cd04476 (RPA1_DBD_C)613Itrimerization core interface
472V, 525D, 526H, 566D, 567S, 569Y, 570F, 571K, 607K, 609L, 613I, 614K
CDD
cd04476 (RPA1_DBD_C)614Ktrimerization core interface
472V, 525D, 526H, 566D, 567S, 569Y, 570F, 571K, 607K, 609L, 613I, 614K
CDD
cd04476 (RPA1_DBD_C) -
Zinc binding site ...
-
RPA1 DBD-C/RPA3 in...
GO term prediction
Biological Process
GO:0006260 DNA replication
GO:0006281 DNA repair
GO:0006310 DNA recombination
Molecular Function
GO:0003676 nucleic acid binding
GO:0003677 DNA binding
Cellular Component
GO:0005634 nucleus