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Entry type
Status
Per-residue features
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Protein
GBC39253.1
Length
440 amino acids
Protein family membership
None predicted.
Domains and repeats
-
Domain1 - 152
- Reverse transcriptase domain (IPR000477)
1
50
100
150
200
250
300
350
400
440
Detailed signature matches
no IPR
Residue annotation
-
putative NTP bindi...39D40L41A42S43G44F73F103D
-
putative active si...39Dputative active site
39D, 40L, 41A, 42S, 43G, 44F, 73F, 74G, 101Y, 103D, 104D, 148L, 149G
CDD
cd01647 (RT_LTR)40Lputative active site
39D, 40L, 41A, 42S, 43G, 44F, 73F, 74G, 101Y, 103D, 104D, 148L, 149G
CDD
cd01647 (RT_LTR)41Aputative active site
39D, 40L, 41A, 42S, 43G, 44F, 73F, 74G, 101Y, 103D, 104D, 148L, 149G
CDD
cd01647 (RT_LTR)42Sputative active site
39D, 40L, 41A, 42S, 43G, 44F, 73F, 74G, 101Y, 103D, 104D, 148L, 149G
CDD
cd01647 (RT_LTR)43Gputative active site
39D, 40L, 41A, 42S, 43G, 44F, 73F, 74G, 101Y, 103D, 104D, 148L, 149G
CDD
cd01647 (RT_LTR)44Fputative active site
39D, 40L, 41A, 42S, 43G, 44F, 73F, 74G, 101Y, 103D, 104D, 148L, 149G
CDD
cd01647 (RT_LTR)73Fputative active site
39D, 40L, 41A, 42S, 43G, 44F, 73F, 74G, 101Y, 103D, 104D, 148L, 149G
CDD
cd01647 (RT_LTR)74Gputative active site
39D, 40L, 41A, 42S, 43G, 44F, 73F, 74G, 101Y, 103D, 104D, 148L, 149G
CDD
cd01647 (RT_LTR)101Yputative active site
39D, 40L, 41A, 42S, 43G, 44F, 73F, 74G, 101Y, 103D, 104D, 148L, 149G
CDD
cd01647 (RT_LTR)103Dputative active site
39D, 40L, 41A, 42S, 43G, 44F, 73F, 74G, 101Y, 103D, 104D, 148L, 149G
CDD
cd01647 (RT_LTR)104Dputative active site
39D, 40L, 41A, 42S, 43G, 44F, 73F, 74G, 101Y, 103D, 104D, 148L, 149G
CDD
cd01647 (RT_LTR)148Lputative active site
39D, 40L, 41A, 42S, 43G, 44F, 73F, 74G, 101Y, 103D, 104D, 148L, 149G
CDD
cd01647 (RT_LTR)149Gputative active site
39D, 40L, 41A, 42S, 43G, 44F, 73F, 74G, 101Y, 103D, 104D, 148L, 149G
CDD
cd01647 (RT_LTR) -
putative nucleic a...74G
-
active site cd09274
-
RNA/DNA hybrid bin...250DRNA/DNA hybrid binding site
250D, 251A, 252S, 253G, 287A, 288V, 289T, 292E, 317D, 350H, 364R
CDD
cd09274 (RNase_HI_RT_Ty3)251ARNA/DNA hybrid binding site
250D, 251A, 252S, 253G, 287A, 288V, 289T, 292E, 317D, 350H, 364R
CDD
cd09274 (RNase_HI_RT_Ty3)252SRNA/DNA hybrid binding site
250D, 251A, 252S, 253G, 287A, 288V, 289T, 292E, 317D, 350H, 364R
CDD
cd09274 (RNase_HI_RT_Ty3)253GRNA/DNA hybrid binding site
250D, 251A, 252S, 253G, 287A, 288V, 289T, 292E, 317D, 350H, 364R
CDD
cd09274 (RNase_HI_RT_Ty3)287ARNA/DNA hybrid binding site
250D, 251A, 252S, 253G, 287A, 288V, 289T, 292E, 317D, 350H, 364R
CDD
cd09274 (RNase_HI_RT_Ty3)288VRNA/DNA hybrid binding site
250D, 251A, 252S, 253G, 287A, 288V, 289T, 292E, 317D, 350H, 364R
CDD
cd09274 (RNase_HI_RT_Ty3)289TRNA/DNA hybrid binding site
250D, 251A, 252S, 253G, 287A, 288V, 289T, 292E, 317D, 350H, 364R
CDD
cd09274 (RNase_HI_RT_Ty3)292ERNA/DNA hybrid binding site
250D, 251A, 252S, 253G, 287A, 288V, 289T, 292E, 317D, 350H, 364R
CDD
cd09274 (RNase_HI_RT_Ty3)317DRNA/DNA hybrid binding site
250D, 251A, 252S, 253G, 287A, 288V, 289T, 292E, 317D, 350H, 364R
CDD
cd09274 (RNase_HI_RT_Ty3)350HRNA/DNA hybrid binding site
250D, 251A, 252S, 253G, 287A, 288V, 289T, 292E, 317D, 350H, 364R
CDD
cd09274 (RNase_HI_RT_Ty3)364RRNA/DNA hybrid binding site
250D, 251A, 252S, 253G, 287A, 288V, 289T, 292E, 317D, 350H, 364R
CDD
cd09274 (RNase_HI_RT_Ty3)
GO term prediction
Biological Process
None predicted.
Molecular Function
None predicted.
Cellular Component
None predicted.