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Entry type
Status
Per-residue features
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Protein
GBC39113.1
Length
1,640 amino acids
Protein family membership
None predicted.
Domains and repeats
-
Domain
1
200
400
600
800
1000
1200
1400
1640
Detailed signature matches
no IPR
Residue annotation
-
Catalytic residue ...
-
catalytic motif cd...
-
inhibitor binding ...
-
Active site flap c...
-
putative NTP bindi...
-
putative active si...1,070Fputative active site
1,036D, 1,037L, 1,038A, 1,039S, 1,040G, 1,041Y, 1,070F, 1,071G, 1,077Y, 1,079D, 1,080D, 1,125L, 1,126G
CDD
cd01647 (RT_LTR)1,071Gputative active site
1,036D, 1,037L, 1,038A, 1,039S, 1,040G, 1,041Y, 1,070F, 1,071G, 1,077Y, 1,079D, 1,080D, 1,125L, 1,126G
CDD
cd01647 (RT_LTR)1,077Yputative active site
1,036D, 1,037L, 1,038A, 1,039S, 1,040G, 1,041Y, 1,070F, 1,071G, 1,077Y, 1,079D, 1,080D, 1,125L, 1,126G
CDD
cd01647 (RT_LTR)1,079Dputative active site
1,036D, 1,037L, 1,038A, 1,039S, 1,040G, 1,041Y, 1,070F, 1,071G, 1,077Y, 1,079D, 1,080D, 1,125L, 1,126G
CDD
cd01647 (RT_LTR)1,080Dputative active site
1,036D, 1,037L, 1,038A, 1,039S, 1,040G, 1,041Y, 1,070F, 1,071G, 1,077Y, 1,079D, 1,080D, 1,125L, 1,126G
CDD
cd01647 (RT_LTR)1,125Lputative active site
1,036D, 1,037L, 1,038A, 1,039S, 1,040G, 1,041Y, 1,070F, 1,071G, 1,077Y, 1,079D, 1,080D, 1,125L, 1,126G
CDD
cd01647 (RT_LTR)1,126Gputative active site
1,036D, 1,037L, 1,038A, 1,039S, 1,040G, 1,041Y, 1,070F, 1,071G, 1,077Y, 1,079D, 1,080D, 1,125L, 1,126G
CDD
cd01647 (RT_LTR) -
putative nucleic a...1,071G
-
active site cd092741,227D1,269E1,294D1,337D
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RNA/DNA hybrid bin...1,227DRNA/DNA hybrid binding site
1,227D, 1,228A, 1,229S, 1,230G, 1,264P, 1,265I, 1,266T, 1,269E, 1,294D, 1,327H, 1,341R
CDD
cd09274 (RNase_HI_RT_Ty3)1,228ARNA/DNA hybrid binding site
1,227D, 1,228A, 1,229S, 1,230G, 1,264P, 1,265I, 1,266T, 1,269E, 1,294D, 1,327H, 1,341R
CDD
cd09274 (RNase_HI_RT_Ty3)1,229SRNA/DNA hybrid binding site
1,227D, 1,228A, 1,229S, 1,230G, 1,264P, 1,265I, 1,266T, 1,269E, 1,294D, 1,327H, 1,341R
CDD
cd09274 (RNase_HI_RT_Ty3)1,230GRNA/DNA hybrid binding site
1,227D, 1,228A, 1,229S, 1,230G, 1,264P, 1,265I, 1,266T, 1,269E, 1,294D, 1,327H, 1,341R
CDD
cd09274 (RNase_HI_RT_Ty3)1,264PRNA/DNA hybrid binding site
1,227D, 1,228A, 1,229S, 1,230G, 1,264P, 1,265I, 1,266T, 1,269E, 1,294D, 1,327H, 1,341R
CDD
cd09274 (RNase_HI_RT_Ty3)1,265IRNA/DNA hybrid binding site
1,227D, 1,228A, 1,229S, 1,230G, 1,264P, 1,265I, 1,266T, 1,269E, 1,294D, 1,327H, 1,341R
CDD
cd09274 (RNase_HI_RT_Ty3)1,266TRNA/DNA hybrid binding site
1,227D, 1,228A, 1,229S, 1,230G, 1,264P, 1,265I, 1,266T, 1,269E, 1,294D, 1,327H, 1,341R
CDD
cd09274 (RNase_HI_RT_Ty3)1,269ERNA/DNA hybrid binding site
1,227D, 1,228A, 1,229S, 1,230G, 1,264P, 1,265I, 1,266T, 1,269E, 1,294D, 1,327H, 1,341R
CDD
cd09274 (RNase_HI_RT_Ty3)1,294DRNA/DNA hybrid binding site
1,227D, 1,228A, 1,229S, 1,230G, 1,264P, 1,265I, 1,266T, 1,269E, 1,294D, 1,327H, 1,341R
CDD
cd09274 (RNase_HI_RT_Ty3)1,327HRNA/DNA hybrid binding site
1,227D, 1,228A, 1,229S, 1,230G, 1,264P, 1,265I, 1,266T, 1,269E, 1,294D, 1,327H, 1,341R
CDD
cd09274 (RNase_HI_RT_Ty3)1,341RRNA/DNA hybrid binding site
1,227D, 1,228A, 1,229S, 1,230G, 1,264P, 1,265I, 1,266T, 1,269E, 1,294D, 1,327H, 1,341R
CDD
cd09274 (RNase_HI_RT_Ty3)
GO term prediction
Biological Process
GO:0006508 proteolysis
Molecular Function
GO:0003676 nucleic acid binding
GO:0004190 aspartic-type endopeptidase activity
GO:0008270 zinc ion binding
Cellular Component
None predicted.