Filter view on
Entry type
Status
Per-residue features
Colour by
Protein
GBC37823.1
Length
76 amino acids
Protein family membership
- Small nuclear ribonucleoprotein G (IPR034098)
Domains and repeats
-
Domain7 - 74
- LSM domain (IPR010920)
- LSM domain, eukaryotic/archaea-type (IPR001163)
- LSM domain (IPR010920)
1
10
20
30
40
50
60
70
76
Detailed signature matches

Unintegrated signatures
-
PIRSF037188 (Lsm7)1 - 75
Residue annotation
-
heptamer interface...8Eheptamer interface
8E, 12Y, 20Q, 25R, 38M, 59M, 61V, 62I, 64G, 67V, 68V, 69I, 70M, 71E, 73L
CDD
cd01719 (Sm_G)12Yheptamer interface
8E, 12Y, 20Q, 25R, 38M, 59M, 61V, 62I, 64G, 67V, 68V, 69I, 70M, 71E, 73L
CDD
cd01719 (Sm_G)20Qheptamer interface
8E, 12Y, 20Q, 25R, 38M, 59M, 61V, 62I, 64G, 67V, 68V, 69I, 70M, 71E, 73L
CDD
cd01719 (Sm_G)25Rheptamer interface
8E, 12Y, 20Q, 25R, 38M, 59M, 61V, 62I, 64G, 67V, 68V, 69I, 70M, 71E, 73L
CDD
cd01719 (Sm_G)38Mheptamer interface
8E, 12Y, 20Q, 25R, 38M, 59M, 61V, 62I, 64G, 67V, 68V, 69I, 70M, 71E, 73L
CDD
cd01719 (Sm_G)59Mheptamer interface
8E, 12Y, 20Q, 25R, 38M, 59M, 61V, 62I, 64G, 67V, 68V, 69I, 70M, 71E, 73L
CDD
cd01719 (Sm_G)61Vheptamer interface
8E, 12Y, 20Q, 25R, 38M, 59M, 61V, 62I, 64G, 67V, 68V, 69I, 70M, 71E, 73L
CDD
cd01719 (Sm_G)62Iheptamer interface
8E, 12Y, 20Q, 25R, 38M, 59M, 61V, 62I, 64G, 67V, 68V, 69I, 70M, 71E, 73L
CDD
cd01719 (Sm_G)64Gheptamer interface
8E, 12Y, 20Q, 25R, 38M, 59M, 61V, 62I, 64G, 67V, 68V, 69I, 70M, 71E, 73L
CDD
cd01719 (Sm_G)67Vheptamer interface
8E, 12Y, 20Q, 25R, 38M, 59M, 61V, 62I, 64G, 67V, 68V, 69I, 70M, 71E, 73L
CDD
cd01719 (Sm_G)68Vheptamer interface
8E, 12Y, 20Q, 25R, 38M, 59M, 61V, 62I, 64G, 67V, 68V, 69I, 70M, 71E, 73L
CDD
cd01719 (Sm_G)69Iheptamer interface
8E, 12Y, 20Q, 25R, 38M, 59M, 61V, 62I, 64G, 67V, 68V, 69I, 70M, 71E, 73L
CDD
cd01719 (Sm_G)70Mheptamer interface
8E, 12Y, 20Q, 25R, 38M, 59M, 61V, 62I, 64G, 67V, 68V, 69I, 70M, 71E, 73L
CDD
cd01719 (Sm_G)71Eheptamer interface
8E, 12Y, 20Q, 25R, 38M, 59M, 61V, 62I, 64G, 67V, 68V, 69I, 70M, 71E, 73L
CDD
cd01719 (Sm_G)73Lheptamer interface
8E, 12Y, 20Q, 25R, 38M, 59M, 61V, 62I, 64G, 67V, 68V, 69I, 70M, 71E, 73L
CDD
cd01719 (Sm_G) -
Sm1 motif cd0171917LSm1 motif
17L, 18F, 19I, 20Q, 21L, 22N, 23G, 25R, 26K, 27V, 28T, 29G, 30I, 31L, 32R, 33G, 34Y, 35D, 36P, 37F, 39N, 40L, 41V, 42L, 43D
CDD
cd01719 (Sm_G)18FSm1 motif
17L, 18F, 19I, 20Q, 21L, 22N, 23G, 25R, 26K, 27V, 28T, 29G, 30I, 31L, 32R, 33G, 34Y, 35D, 36P, 37F, 39N, 40L, 41V, 42L, 43D
CDD
cd01719 (Sm_G)19ISm1 motif
17L, 18F, 19I, 20Q, 21L, 22N, 23G, 25R, 26K, 27V, 28T, 29G, 30I, 31L, 32R, 33G, 34Y, 35D, 36P, 37F, 39N, 40L, 41V, 42L, 43D
CDD
cd01719 (Sm_G)20QSm1 motif
17L, 18F, 19I, 20Q, 21L, 22N, 23G, 25R, 26K, 27V, 28T, 29G, 30I, 31L, 32R, 33G, 34Y, 35D, 36P, 37F, 39N, 40L, 41V, 42L, 43D
CDD
cd01719 (Sm_G)21LSm1 motif
17L, 18F, 19I, 20Q, 21L, 22N, 23G, 25R, 26K, 27V, 28T, 29G, 30I, 31L, 32R, 33G, 34Y, 35D, 36P, 37F, 39N, 40L, 41V, 42L, 43D
CDD
cd01719 (Sm_G)22NSm1 motif
17L, 18F, 19I, 20Q, 21L, 22N, 23G, 25R, 26K, 27V, 28T, 29G, 30I, 31L, 32R, 33G, 34Y, 35D, 36P, 37F, 39N, 40L, 41V, 42L, 43D
CDD
cd01719 (Sm_G)23GSm1 motif
17L, 18F, 19I, 20Q, 21L, 22N, 23G, 25R, 26K, 27V, 28T, 29G, 30I, 31L, 32R, 33G, 34Y, 35D, 36P, 37F, 39N, 40L, 41V, 42L, 43D
CDD
cd01719 (Sm_G)25RSm1 motif
17L, 18F, 19I, 20Q, 21L, 22N, 23G, 25R, 26K, 27V, 28T, 29G, 30I, 31L, 32R, 33G, 34Y, 35D, 36P, 37F, 39N, 40L, 41V, 42L, 43D
CDD
cd01719 (Sm_G)26KSm1 motif
17L, 18F, 19I, 20Q, 21L, 22N, 23G, 25R, 26K, 27V, 28T, 29G, 30I, 31L, 32R, 33G, 34Y, 35D, 36P, 37F, 39N, 40L, 41V, 42L, 43D
CDD
cd01719 (Sm_G)27VSm1 motif
17L, 18F, 19I, 20Q, 21L, 22N, 23G, 25R, 26K, 27V, 28T, 29G, 30I, 31L, 32R, 33G, 34Y, 35D, 36P, 37F, 39N, 40L, 41V, 42L, 43D
CDD
cd01719 (Sm_G)28TSm1 motif
17L, 18F, 19I, 20Q, 21L, 22N, 23G, 25R, 26K, 27V, 28T, 29G, 30I, 31L, 32R, 33G, 34Y, 35D, 36P, 37F, 39N, 40L, 41V, 42L, 43D
CDD
cd01719 (Sm_G)29GSm1 motif
17L, 18F, 19I, 20Q, 21L, 22N, 23G, 25R, 26K, 27V, 28T, 29G, 30I, 31L, 32R, 33G, 34Y, 35D, 36P, 37F, 39N, 40L, 41V, 42L, 43D
CDD
cd01719 (Sm_G)30ISm1 motif
17L, 18F, 19I, 20Q, 21L, 22N, 23G, 25R, 26K, 27V, 28T, 29G, 30I, 31L, 32R, 33G, 34Y, 35D, 36P, 37F, 39N, 40L, 41V, 42L, 43D
CDD
cd01719 (Sm_G)31LSm1 motif
17L, 18F, 19I, 20Q, 21L, 22N, 23G, 25R, 26K, 27V, 28T, 29G, 30I, 31L, 32R, 33G, 34Y, 35D, 36P, 37F, 39N, 40L, 41V, 42L, 43D
CDD
cd01719 (Sm_G)32RSm1 motif
17L, 18F, 19I, 20Q, 21L, 22N, 23G, 25R, 26K, 27V, 28T, 29G, 30I, 31L, 32R, 33G, 34Y, 35D, 36P, 37F, 39N, 40L, 41V, 42L, 43D
CDD
cd01719 (Sm_G)33GSm1 motif
17L, 18F, 19I, 20Q, 21L, 22N, 23G, 25R, 26K, 27V, 28T, 29G, 30I, 31L, 32R, 33G, 34Y, 35D, 36P, 37F, 39N, 40L, 41V, 42L, 43D
CDD
cd01719 (Sm_G)34YSm1 motif
17L, 18F, 19I, 20Q, 21L, 22N, 23G, 25R, 26K, 27V, 28T, 29G, 30I, 31L, 32R, 33G, 34Y, 35D, 36P, 37F, 39N, 40L, 41V, 42L, 43D
CDD
cd01719 (Sm_G)35DSm1 motif
17L, 18F, 19I, 20Q, 21L, 22N, 23G, 25R, 26K, 27V, 28T, 29G, 30I, 31L, 32R, 33G, 34Y, 35D, 36P, 37F, 39N, 40L, 41V, 42L, 43D
CDD
cd01719 (Sm_G)36PSm1 motif
17L, 18F, 19I, 20Q, 21L, 22N, 23G, 25R, 26K, 27V, 28T, 29G, 30I, 31L, 32R, 33G, 34Y, 35D, 36P, 37F, 39N, 40L, 41V, 42L, 43D
CDD
cd01719 (Sm_G)37FSm1 motif
17L, 18F, 19I, 20Q, 21L, 22N, 23G, 25R, 26K, 27V, 28T, 29G, 30I, 31L, 32R, 33G, 34Y, 35D, 36P, 37F, 39N, 40L, 41V, 42L, 43D
CDD
cd01719 (Sm_G)39NSm1 motif
17L, 18F, 19I, 20Q, 21L, 22N, 23G, 25R, 26K, 27V, 28T, 29G, 30I, 31L, 32R, 33G, 34Y, 35D, 36P, 37F, 39N, 40L, 41V, 42L, 43D
CDD
cd01719 (Sm_G)40LSm1 motif
17L, 18F, 19I, 20Q, 21L, 22N, 23G, 25R, 26K, 27V, 28T, 29G, 30I, 31L, 32R, 33G, 34Y, 35D, 36P, 37F, 39N, 40L, 41V, 42L, 43D
CDD
cd01719 (Sm_G)41VSm1 motif
17L, 18F, 19I, 20Q, 21L, 22N, 23G, 25R, 26K, 27V, 28T, 29G, 30I, 31L, 32R, 33G, 34Y, 35D, 36P, 37F, 39N, 40L, 41V, 42L, 43D
CDD
cd01719 (Sm_G)42LSm1 motif
17L, 18F, 19I, 20Q, 21L, 22N, 23G, 25R, 26K, 27V, 28T, 29G, 30I, 31L, 32R, 33G, 34Y, 35D, 36P, 37F, 39N, 40L, 41V, 42L, 43D
CDD
cd01719 (Sm_G)43DSm1 motif
17L, 18F, 19I, 20Q, 21L, 22N, 23G, 25R, 26K, 27V, 28T, 29G, 30I, 31L, 32R, 33G, 34Y, 35D, 36P, 37F, 39N, 40L, 41V, 42L, 43D
CDD
cd01719 (Sm_G) -
RNA binding site c...
-
Sm2 motif cd0171959M60V61V62I63R64G65N66S67V68V69I70M
GO term prediction
Biological Process
GO:0000387 spliceosomal snRNP assembly
Molecular Function
None predicted.
Cellular Component
GO:0005681 spliceosomal complex