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Entry type
Status
Per-residue features
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Protein
GBC36526.1
Length
1,665 amino acids
Protein family membership
None predicted.
Domains and repeats
-
Domain258 - 356
- Retrotransposon gag domain (IPR005162)
474 - 498- Zinc finger, CCHC-type (IPR001878)
695 - 792- Aspartic peptidase domain (IPR021109)
974 - 1,154- Reverse transcriptase domain (IPR000477)
1
200
400
600
800
1000
1200
1400
1665
Detailed signature matches
no IPR
Unintegrated signatures
Residue annotation
-
Catalytic residue ...709D
-
catalytic motif cd...
-
inhibitor binding ...709D711G713A737I738K739T778I
-
Active site flap c...737I738K739T740A744R745V746R747S
-
putative NTP bindi...1,040Dputative NTP binding site
1,040D, 1,041L, 1,042A, 1,043S, 1,044G, 1,045Y, 1,074F, 1,104D
CDD
cd01647 (RT_LTR)1,041Lputative NTP binding site
1,040D, 1,041L, 1,042A, 1,043S, 1,044G, 1,045Y, 1,074F, 1,104D
CDD
cd01647 (RT_LTR)1,042Aputative NTP binding site
1,040D, 1,041L, 1,042A, 1,043S, 1,044G, 1,045Y, 1,074F, 1,104D
CDD
cd01647 (RT_LTR)1,043Sputative NTP binding site
1,040D, 1,041L, 1,042A, 1,043S, 1,044G, 1,045Y, 1,074F, 1,104D
CDD
cd01647 (RT_LTR)1,044Gputative NTP binding site
1,040D, 1,041L, 1,042A, 1,043S, 1,044G, 1,045Y, 1,074F, 1,104D
CDD
cd01647 (RT_LTR)1,045Yputative NTP binding site
1,040D, 1,041L, 1,042A, 1,043S, 1,044G, 1,045Y, 1,074F, 1,104D
CDD
cd01647 (RT_LTR)1,074Fputative NTP binding site
1,040D, 1,041L, 1,042A, 1,043S, 1,044G, 1,045Y, 1,074F, 1,104D
CDD
cd01647 (RT_LTR)1,104Dputative NTP binding site
1,040D, 1,041L, 1,042A, 1,043S, 1,044G, 1,045Y, 1,074F, 1,104D
CDD
cd01647 (RT_LTR) -
putative active si...1,040Dputative active site
1,040D, 1,041L, 1,042A, 1,043S, 1,044G, 1,045Y, 1,074F, 1,075G, 1,102Y, 1,104D, 1,105D, 1,150L, 1,151G
CDD
cd01647 (RT_LTR)1,041Lputative active site
1,040D, 1,041L, 1,042A, 1,043S, 1,044G, 1,045Y, 1,074F, 1,075G, 1,102Y, 1,104D, 1,105D, 1,150L, 1,151G
CDD
cd01647 (RT_LTR)1,042Aputative active site
1,040D, 1,041L, 1,042A, 1,043S, 1,044G, 1,045Y, 1,074F, 1,075G, 1,102Y, 1,104D, 1,105D, 1,150L, 1,151G
CDD
cd01647 (RT_LTR)1,043Sputative active site
1,040D, 1,041L, 1,042A, 1,043S, 1,044G, 1,045Y, 1,074F, 1,075G, 1,102Y, 1,104D, 1,105D, 1,150L, 1,151G
CDD
cd01647 (RT_LTR)1,044Gputative active site
1,040D, 1,041L, 1,042A, 1,043S, 1,044G, 1,045Y, 1,074F, 1,075G, 1,102Y, 1,104D, 1,105D, 1,150L, 1,151G
CDD
cd01647 (RT_LTR)1,045Yputative active site
1,040D, 1,041L, 1,042A, 1,043S, 1,044G, 1,045Y, 1,074F, 1,075G, 1,102Y, 1,104D, 1,105D, 1,150L, 1,151G
CDD
cd01647 (RT_LTR)1,074Fputative active site
1,040D, 1,041L, 1,042A, 1,043S, 1,044G, 1,045Y, 1,074F, 1,075G, 1,102Y, 1,104D, 1,105D, 1,150L, 1,151G
CDD
cd01647 (RT_LTR)1,075Gputative active site
1,040D, 1,041L, 1,042A, 1,043S, 1,044G, 1,045Y, 1,074F, 1,075G, 1,102Y, 1,104D, 1,105D, 1,150L, 1,151G
CDD
cd01647 (RT_LTR)1,102Yputative active site
1,040D, 1,041L, 1,042A, 1,043S, 1,044G, 1,045Y, 1,074F, 1,075G, 1,102Y, 1,104D, 1,105D, 1,150L, 1,151G
CDD
cd01647 (RT_LTR)1,104Dputative active site
1,040D, 1,041L, 1,042A, 1,043S, 1,044G, 1,045Y, 1,074F, 1,075G, 1,102Y, 1,104D, 1,105D, 1,150L, 1,151G
CDD
cd01647 (RT_LTR)1,105Dputative active site
1,040D, 1,041L, 1,042A, 1,043S, 1,044G, 1,045Y, 1,074F, 1,075G, 1,102Y, 1,104D, 1,105D, 1,150L, 1,151G
CDD
cd01647 (RT_LTR)1,150Lputative active site
1,040D, 1,041L, 1,042A, 1,043S, 1,044G, 1,045Y, 1,074F, 1,075G, 1,102Y, 1,104D, 1,105D, 1,150L, 1,151G
CDD
cd01647 (RT_LTR)1,151Gputative active site
1,040D, 1,041L, 1,042A, 1,043S, 1,044G, 1,045Y, 1,074F, 1,075G, 1,102Y, 1,104D, 1,105D, 1,150L, 1,151G
CDD
cd01647 (RT_LTR) -
putative nucleic a...1,075G
-
active site cd092741,252D1,294E1,319D1,362D
-
RNA/DNA hybrid bin...1,252DRNA/DNA hybrid binding site
1,252D, 1,253A, 1,254S, 1,255G, 1,289P, 1,290I, 1,291T, 1,294E, 1,319D, 1,352H, 1,366R
CDD
cd09274 (RNase_HI_RT_Ty3)1,253ARNA/DNA hybrid binding site
1,252D, 1,253A, 1,254S, 1,255G, 1,289P, 1,290I, 1,291T, 1,294E, 1,319D, 1,352H, 1,366R
CDD
cd09274 (RNase_HI_RT_Ty3)1,254SRNA/DNA hybrid binding site
1,252D, 1,253A, 1,254S, 1,255G, 1,289P, 1,290I, 1,291T, 1,294E, 1,319D, 1,352H, 1,366R
CDD
cd09274 (RNase_HI_RT_Ty3)1,255GRNA/DNA hybrid binding site
1,252D, 1,253A, 1,254S, 1,255G, 1,289P, 1,290I, 1,291T, 1,294E, 1,319D, 1,352H, 1,366R
CDD
cd09274 (RNase_HI_RT_Ty3)1,289PRNA/DNA hybrid binding site
1,252D, 1,253A, 1,254S, 1,255G, 1,289P, 1,290I, 1,291T, 1,294E, 1,319D, 1,352H, 1,366R
CDD
cd09274 (RNase_HI_RT_Ty3)1,290IRNA/DNA hybrid binding site
1,252D, 1,253A, 1,254S, 1,255G, 1,289P, 1,290I, 1,291T, 1,294E, 1,319D, 1,352H, 1,366R
CDD
cd09274 (RNase_HI_RT_Ty3)1,291TRNA/DNA hybrid binding site
1,252D, 1,253A, 1,254S, 1,255G, 1,289P, 1,290I, 1,291T, 1,294E, 1,319D, 1,352H, 1,366R
CDD
cd09274 (RNase_HI_RT_Ty3)1,294ERNA/DNA hybrid binding site
1,252D, 1,253A, 1,254S, 1,255G, 1,289P, 1,290I, 1,291T, 1,294E, 1,319D, 1,352H, 1,366R
CDD
cd09274 (RNase_HI_RT_Ty3)1,319DRNA/DNA hybrid binding site
1,252D, 1,253A, 1,254S, 1,255G, 1,289P, 1,290I, 1,291T, 1,294E, 1,319D, 1,352H, 1,366R
CDD
cd09274 (RNase_HI_RT_Ty3)1,352HRNA/DNA hybrid binding site
1,252D, 1,253A, 1,254S, 1,255G, 1,289P, 1,290I, 1,291T, 1,294E, 1,319D, 1,352H, 1,366R
CDD
cd09274 (RNase_HI_RT_Ty3)1,366RRNA/DNA hybrid binding site
1,252D, 1,253A, 1,254S, 1,255G, 1,289P, 1,290I, 1,291T, 1,294E, 1,319D, 1,352H, 1,366R
CDD
cd09274 (RNase_HI_RT_Ty3)
GO term prediction
Biological Process
GO:0006508 proteolysis
Molecular Function
GO:0003676 nucleic acid binding
GO:0004190 aspartic-type endopeptidase activity
GO:0008270 zinc ion binding
Cellular Component
None predicted.