Protein

GBC34996.1

Length
1,173 amino acids

Protein family membership

Domains and repeats

  1. Domain
  2. Domain
1 200 400 600 800 1000 1173

Detailed signature matches

  1. Family IPR016438
    ATP-dependent RNA helicase Ski2
    1. PIRSF005198 (SKI2)
  2. Domain IPR014001
    Helicase superfamily 1/2, ATP-binding domain
    1. SM00487 (ultradead3)
    2. PS51192 (HELICASE_A...)
  3. Domain IPR011545
    DEAD/DEAH box helicase domain
    1. PF00270 (DEAD)
  4. Domain IPR027417
    P-loop containing nucleoside triphosphate hydrolase
    1. SSF52540 (P-loop co...)
  5. Domain IPR001650
    Helicase, C-terminal
    1. SM00490 (helicmild6)
    2. PF00271 (Helicase_C)
    3. PS51194 (HELICASE_CTER)
  6. Domain IPR025696
    rRNA-processing arch domain
    1. PF13234 (rRNA_proc-...)
  7. Domain IPR012961
    ATP-dependent RNA helicase Ski2, C-terminal
    1. SM01142 (DSHCT_2)
    2. PF08148 (DSHCT)
Unintegrated signatures no IPR
Unintegrated signatures
  1. cd00046 (DEXDc)
  2. cd00079 (HELICc)
  3. mobidb-lite (disord...)

Residue annotation

  1. putative Mg++ bind...
  2. nucleotide binding...
  3. ATP-binding site c...

GO term prediction

Biological Process

GO:0006401 RNA catabolic process

Molecular Function

GO:0003676 nucleic acid binding
GO:0003723 RNA binding
GO:0003724 RNA helicase activity
GO:0005524 ATP binding

Cellular Component

None predicted.