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Protein

GBC33782.1

Length

182 amino acids

Protein family membership

None predicted.

Domains and repeats

Domain
4 - 70
Reverse transcriptase domain (IPR000477)

1 20 40 60 80 100 120 140 160 182

Detailed signature matches

Domain

Reverse transcriptase domain

PF00078 (RVT_1)

4 - 70

Pfam
PF00078 (RVT_1)

Unintegrated signatures

no IPR

Unintegrated signatures

SSF56672 (DNA/RNA p...)

1 - 172

SUPERFAMILY
SSF56672 (DNA/RNA polymerases)
cd01647 (RT_LTR)

2 - 72

CDD
cd01647 (RT_LTR)
cd09274 (RNase_HI_R...)

90 - 179

CDD
cd09274 (RNase_HI_RT_Ty3)

Residue annotation

putative NTP bindi...

41D

putative NTP binding site
41D, 42L, 43A, 44S, 45G, 46Y
CDD
cd01647 (RT_LTR)

42L

putative NTP binding site
41D, 42L, 43A, 44S, 45G, 46Y
CDD
cd01647 (RT_LTR)

43A

putative NTP binding site
41D, 42L, 43A, 44S, 45G, 46Y
CDD
cd01647 (RT_LTR)

44S

putative NTP binding site
41D, 42L, 43A, 44S, 45G, 46Y
CDD
cd01647 (RT_LTR)

45G

putative NTP binding site
41D, 42L, 43A, 44S, 45G, 46Y
CDD
cd01647 (RT_LTR)

46Y

putative NTP binding site
41D, 42L, 43A, 44S, 45G, 46Y
CDD
cd01647 (RT_LTR)
putative active si...

41D

putative active site
41D, 42L, 43A, 44S, 45G, 46Y
CDD
cd01647 (RT_LTR)

42L

putative active site
41D, 42L, 43A, 44S, 45G, 46Y
CDD
cd01647 (RT_LTR)

43A

putative active site
41D, 42L, 43A, 44S, 45G, 46Y
CDD
cd01647 (RT_LTR)

44S

putative active site
41D, 42L, 43A, 44S, 45G, 46Y
CDD
cd01647 (RT_LTR)

45G

putative active site
41D, 42L, 43A, 44S, 45G, 46Y
CDD
cd01647 (RT_LTR)

46Y

putative active site
41D, 42L, 43A, 44S, 45G, 46Y
CDD
cd01647 (RT_LTR)
RNA/DNA hybrid bin...

94D

RNA/DNA hybrid binding site
94D, 95A, 96S, 97T, 131S, 132A, 133T, 136E, 161D
CDD
cd09274 (RNase_HI_RT_Ty3)

95A

RNA/DNA hybrid binding site
94D, 95A, 96S, 97T, 131S, 132A, 133T, 136E, 161D
CDD
cd09274 (RNase_HI_RT_Ty3)

96S

RNA/DNA hybrid binding site
94D, 95A, 96S, 97T, 131S, 132A, 133T, 136E, 161D
CDD
cd09274 (RNase_HI_RT_Ty3)

97T

RNA/DNA hybrid binding site
94D, 95A, 96S, 97T, 131S, 132A, 133T, 136E, 161D
CDD
cd09274 (RNase_HI_RT_Ty3)

131S

RNA/DNA hybrid binding site
94D, 95A, 96S, 97T, 131S, 132A, 133T, 136E, 161D
CDD
cd09274 (RNase_HI_RT_Ty3)

132A

RNA/DNA hybrid binding site
94D, 95A, 96S, 97T, 131S, 132A, 133T, 136E, 161D
CDD
cd09274 (RNase_HI_RT_Ty3)

133T

RNA/DNA hybrid binding site
94D, 95A, 96S, 97T, 131S, 132A, 133T, 136E, 161D
CDD
cd09274 (RNase_HI_RT_Ty3)

136E

RNA/DNA hybrid binding site
94D, 95A, 96S, 97T, 131S, 132A, 133T, 136E, 161D
CDD
cd09274 (RNase_HI_RT_Ty3)

161D

RNA/DNA hybrid binding site
94D, 95A, 96S, 97T, 131S, 132A, 133T, 136E, 161D
CDD
cd09274 (RNase_HI_RT_Ty3)

GO term prediction

Biological Process

None predicted.

Molecular Function

None predicted.

Cellular Component

None predicted.