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Entry type
Status
Per-residue features
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Protein
GBC31050.1
Length
1,571 amino acids
Protein family membership
None predicted.
Domains and repeats
-
Domain232 - 294
- RNA recognition motif domain (IPR000504)
329 - 385- RNA recognition motif domain (IPR000504)
405 - 418- Zinc finger, CCHC-type (IPR001878)
676 - 785- Endonuclease/exonuclease/phosphatase (IPR005135)
1,118 - 1,410- Reverse transcriptase domain (IPR000477)
1
200
400
600
800
1000
1200
1400
1571
Detailed signature matches
no IPR
Unintegrated signatures
-
530 - 564
-
SSF56672 (DNA/RNA p...)
-
cd01650 (RT_nLTR_like)1,132 - 1,411
-
mobidb-lite (disord...)495 - 529564 - 6051 - 111
Residue annotation
-
putative NTP bindi...1,221Dputative NTP binding site
1,221D, 1,222M, 1,223S, 1,224K, 1,225A, 1,226Y, 1,280Q, 1,336D
CDD
cd01650 (RT_nLTR_like)1,222Mputative NTP binding site
1,221D, 1,222M, 1,223S, 1,224K, 1,225A, 1,226Y, 1,280Q, 1,336D
CDD
cd01650 (RT_nLTR_like)1,223Sputative NTP binding site
1,221D, 1,222M, 1,223S, 1,224K, 1,225A, 1,226Y, 1,280Q, 1,336D
CDD
cd01650 (RT_nLTR_like)1,224Kputative NTP binding site
1,221D, 1,222M, 1,223S, 1,224K, 1,225A, 1,226Y, 1,280Q, 1,336D
CDD
cd01650 (RT_nLTR_like)1,225Aputative NTP binding site
1,221D, 1,222M, 1,223S, 1,224K, 1,225A, 1,226Y, 1,280Q, 1,336D
CDD
cd01650 (RT_nLTR_like)1,226Yputative NTP binding site
1,221D, 1,222M, 1,223S, 1,224K, 1,225A, 1,226Y, 1,280Q, 1,336D
CDD
cd01650 (RT_nLTR_like)1,280Qputative NTP binding site
1,221D, 1,222M, 1,223S, 1,224K, 1,225A, 1,226Y, 1,280Q, 1,336D
CDD
cd01650 (RT_nLTR_like)1,336Dputative NTP binding site
1,221D, 1,222M, 1,223S, 1,224K, 1,225A, 1,226Y, 1,280Q, 1,336D
CDD
cd01650 (RT_nLTR_like) -
putative active si...1,221Dputative active site
1,221D, 1,222M, 1,223S, 1,224K, 1,225A, 1,226Y, 1,280Q, 1,281G, 1,334Y, 1,336D, 1,337D, 1,407L, 1,408G
CDD
cd01650 (RT_nLTR_like)1,222Mputative active site
1,221D, 1,222M, 1,223S, 1,224K, 1,225A, 1,226Y, 1,280Q, 1,281G, 1,334Y, 1,336D, 1,337D, 1,407L, 1,408G
CDD
cd01650 (RT_nLTR_like)1,223Sputative active site
1,221D, 1,222M, 1,223S, 1,224K, 1,225A, 1,226Y, 1,280Q, 1,281G, 1,334Y, 1,336D, 1,337D, 1,407L, 1,408G
CDD
cd01650 (RT_nLTR_like)1,224Kputative active site
1,221D, 1,222M, 1,223S, 1,224K, 1,225A, 1,226Y, 1,280Q, 1,281G, 1,334Y, 1,336D, 1,337D, 1,407L, 1,408G
CDD
cd01650 (RT_nLTR_like)1,225Aputative active site
1,221D, 1,222M, 1,223S, 1,224K, 1,225A, 1,226Y, 1,280Q, 1,281G, 1,334Y, 1,336D, 1,337D, 1,407L, 1,408G
CDD
cd01650 (RT_nLTR_like)1,226Yputative active site
1,221D, 1,222M, 1,223S, 1,224K, 1,225A, 1,226Y, 1,280Q, 1,281G, 1,334Y, 1,336D, 1,337D, 1,407L, 1,408G
CDD
cd01650 (RT_nLTR_like)1,280Qputative active site
1,221D, 1,222M, 1,223S, 1,224K, 1,225A, 1,226Y, 1,280Q, 1,281G, 1,334Y, 1,336D, 1,337D, 1,407L, 1,408G
CDD
cd01650 (RT_nLTR_like)1,281Gputative active site
1,221D, 1,222M, 1,223S, 1,224K, 1,225A, 1,226Y, 1,280Q, 1,281G, 1,334Y, 1,336D, 1,337D, 1,407L, 1,408G
CDD
cd01650 (RT_nLTR_like)1,334Yputative active site
1,221D, 1,222M, 1,223S, 1,224K, 1,225A, 1,226Y, 1,280Q, 1,281G, 1,334Y, 1,336D, 1,337D, 1,407L, 1,408G
CDD
cd01650 (RT_nLTR_like)1,336Dputative active site
1,221D, 1,222M, 1,223S, 1,224K, 1,225A, 1,226Y, 1,280Q, 1,281G, 1,334Y, 1,336D, 1,337D, 1,407L, 1,408G
CDD
cd01650 (RT_nLTR_like)1,337Dputative active site
1,221D, 1,222M, 1,223S, 1,224K, 1,225A, 1,226Y, 1,280Q, 1,281G, 1,334Y, 1,336D, 1,337D, 1,407L, 1,408G
CDD
cd01650 (RT_nLTR_like)1,407Lputative active site
1,221D, 1,222M, 1,223S, 1,224K, 1,225A, 1,226Y, 1,280Q, 1,281G, 1,334Y, 1,336D, 1,337D, 1,407L, 1,408G
CDD
cd01650 (RT_nLTR_like)1,408Gputative active site
1,221D, 1,222M, 1,223S, 1,224K, 1,225A, 1,226Y, 1,280Q, 1,281G, 1,334Y, 1,336D, 1,337D, 1,407L, 1,408G
CDD
cd01650 (RT_nLTR_like) -
putative nucleic a...1,281G
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0003676 nucleic acid binding
GO:0008270 zinc ion binding
Cellular Component
None predicted.