Protein

GBC29106.1

Length
1,084 amino acids

Protein family membership

None predicted.

Domains and repeats

  1. Domain
1 100 200 300 400 500 600 700 800 900 1000 1084

Detailed signature matches

  1. Domain IPR005162
    Retrotransposon gag domain
    1. PF03732 (Retrotrans...)
  2. Domain IPR001878
    Zinc finger, CCHC-type
    1. PS50158 (ZF_CCHC)
    2. PF00098 (zf-CCHC)
    3. SM00343 (c2hcfinal6)
    4. SSF57756 (Retroviru...)
  3. Domain IPR021109
    Aspartic peptidase domain
    1. SSF50630 (Acid prot...)
  4. Domain IPR000477
    Reverse transcriptase domain
    1. PF00078 (RVT_1)
  5. SITE IPR001969
    Aspartic peptidase, active site
    1. PS00141 (ASP_PROTEASE)
Unintegrated signatures no IPR
Unintegrated signatures
  1. Coil
  2. PF13975 (gag-asp_pr...)
  3. SSF56672 (DNA/RNA p...)
  4. cd00303 (retropepsi...)
  5. cd01647 (RT_LTR)
  6. mobidb-lite (disord...)

Residue annotation

  1. Catalytic residue ...
  2. catalytic motif cd...
  3. inhibitor binding ...
  4. Active site flap c...
  5. putative NTP bindi...
  6. putative active si...
  7. putative nucleic a...

GO term prediction

Biological Process

GO:0006508 proteolysis

Molecular Function

GO:0003676 nucleic acid binding
GO:0004190 aspartic-type endopeptidase activity
GO:0008270 zinc ion binding

Cellular Component

None predicted.