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Entry type
Status
Per-residue features
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Protein
GBC28000.1
Length
1,371 amino acids
Protein family membership
None predicted.
Domains and repeats
-
Domain743 - 845
- Retrotransposon gag domain (IPR005162)
975 - 991- Zinc finger, CCHC-type (IPR001878)
1,112 - 1,143- Zinc finger, CCHC-type (IPR001878)
1,187 - 1,281- Aspartic peptidase domain (IPR021109)
- Peptidase A2A, retrovirus, catalytic (IPR001995)
1
200
400
600
800
1000
1200
1371
Detailed signature matches
no IPR
Unintegrated signatures
-
PF13975 (gag-asp_pr...)1,193 - 1,281
-
cd00303 (retropepsi...)1,192 - 1,281
-
mobidb-lite (disord...)550 - 6301,317 - 1,3711,061 - 1,110243 - 262
Residue annotation
-
Catalytic residue ...1,205D
-
catalytic motif cd...
-
inhibitor binding ...1,205Dinhibitor binding site
1,205D, 1,207G, 1,209G, 1,233L, 1,234T, 1,235I, 1,274I
CDD
cd00303 (retropepsin_like)1,207Ginhibitor binding site
1,205D, 1,207G, 1,209G, 1,233L, 1,234T, 1,235I, 1,274I
CDD
cd00303 (retropepsin_like)1,209Ginhibitor binding site
1,205D, 1,207G, 1,209G, 1,233L, 1,234T, 1,235I, 1,274I
CDD
cd00303 (retropepsin_like)1,233Linhibitor binding site
1,205D, 1,207G, 1,209G, 1,233L, 1,234T, 1,235I, 1,274I
CDD
cd00303 (retropepsin_like)1,234Tinhibitor binding site
1,205D, 1,207G, 1,209G, 1,233L, 1,234T, 1,235I, 1,274I
CDD
cd00303 (retropepsin_like)1,235Iinhibitor binding site
1,205D, 1,207G, 1,209G, 1,233L, 1,234T, 1,235I, 1,274I
CDD
cd00303 (retropepsin_like)1,274Iinhibitor binding site
1,205D, 1,207G, 1,209G, 1,233L, 1,234T, 1,235I, 1,274I
CDD
cd00303 (retropepsin_like) -
Active site flap c...1,233LActive site flap
1,233L, 1,234T, 1,235I, 1,236A, 1,240N, 1,241I, 1,242A, 1,243S
CDD
cd00303 (retropepsin_like)1,234TActive site flap
1,233L, 1,234T, 1,235I, 1,236A, 1,240N, 1,241I, 1,242A, 1,243S
CDD
cd00303 (retropepsin_like)1,235IActive site flap
1,233L, 1,234T, 1,235I, 1,236A, 1,240N, 1,241I, 1,242A, 1,243S
CDD
cd00303 (retropepsin_like)1,236AActive site flap
1,233L, 1,234T, 1,235I, 1,236A, 1,240N, 1,241I, 1,242A, 1,243S
CDD
cd00303 (retropepsin_like)1,240NActive site flap
1,233L, 1,234T, 1,235I, 1,236A, 1,240N, 1,241I, 1,242A, 1,243S
CDD
cd00303 (retropepsin_like)1,241IActive site flap
1,233L, 1,234T, 1,235I, 1,236A, 1,240N, 1,241I, 1,242A, 1,243S
CDD
cd00303 (retropepsin_like)1,242AActive site flap
1,233L, 1,234T, 1,235I, 1,236A, 1,240N, 1,241I, 1,242A, 1,243S
CDD
cd00303 (retropepsin_like)1,243SActive site flap
1,233L, 1,234T, 1,235I, 1,236A, 1,240N, 1,241I, 1,242A, 1,243S
CDD
cd00303 (retropepsin_like)
GO term prediction
Biological Process
GO:0006508 proteolysis
Molecular Function
GO:0003676 nucleic acid binding
GO:0004190 aspartic-type endopeptidase activity
GO:0008270 zinc ion binding
Cellular Component
None predicted.