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Entry type
Status
Per-residue features
Colour by
Protein
GBC20229.1
Length
638 amino acids
Protein family membership
Domains and repeats
-
Domain56 - 225
- RNA recognition motif domain (IPR000504)
237 - 421- RNA recognition motif domain (IPR000504)
508 - 638 -
Domain146 - 217
- RNA recognition motif domain, eukaryote (IPR003954)
238 - 310- RNA recognition motif domain, eukaryote (IPR003954)
341 - 413- RNA recognition motif domain, eukaryote (IPR003954)
1
100
200
300
400
500
638
Detailed signature matches

Unintegrated signatures
-
309 - 336
-
cd12378 (RRM1_I_PABPs)58 - 137
-
cd12379 (RRM2_I_PABPs)143 - 218
-
cd12380 (RRM3_I_PABPs)236 - 315
-
cd12381 (RRM4_I_PABPs)339 - 417
-
mobidb-lite (disord...)483 - 561
Residue annotation
-
RNA binding site c...58SRNA binding site
58S, 60Y, 70E, 87R, 88V, 90R, 91D, 92A, 95R, 98L, 100Y, 102Y, 104N, 129R, 131M, 132W, 133S, 134Q, 135R
CDD
cd12378 (RRM1_I_PABPs)60YRNA binding site
58S, 60Y, 70E, 87R, 88V, 90R, 91D, 92A, 95R, 98L, 100Y, 102Y, 104N, 129R, 131M, 132W, 133S, 134Q, 135R
CDD
cd12378 (RRM1_I_PABPs)70ERNA binding site
58S, 60Y, 70E, 87R, 88V, 90R, 91D, 92A, 95R, 98L, 100Y, 102Y, 104N, 129R, 131M, 132W, 133S, 134Q, 135R
CDD
cd12378 (RRM1_I_PABPs)87RRNA binding site
58S, 60Y, 70E, 87R, 88V, 90R, 91D, 92A, 95R, 98L, 100Y, 102Y, 104N, 129R, 131M, 132W, 133S, 134Q, 135R
CDD
cd12378 (RRM1_I_PABPs)88VRNA binding site
58S, 60Y, 70E, 87R, 88V, 90R, 91D, 92A, 95R, 98L, 100Y, 102Y, 104N, 129R, 131M, 132W, 133S, 134Q, 135R
CDD
cd12378 (RRM1_I_PABPs)90RRNA binding site
58S, 60Y, 70E, 87R, 88V, 90R, 91D, 92A, 95R, 98L, 100Y, 102Y, 104N, 129R, 131M, 132W, 133S, 134Q, 135R
CDD
cd12378 (RRM1_I_PABPs)91DRNA binding site
58S, 60Y, 70E, 87R, 88V, 90R, 91D, 92A, 95R, 98L, 100Y, 102Y, 104N, 129R, 131M, 132W, 133S, 134Q, 135R
CDD
cd12378 (RRM1_I_PABPs)92ARNA binding site
58S, 60Y, 70E, 87R, 88V, 90R, 91D, 92A, 95R, 98L, 100Y, 102Y, 104N, 129R, 131M, 132W, 133S, 134Q, 135R
CDD
cd12378 (RRM1_I_PABPs)95RRNA binding site
58S, 60Y, 70E, 87R, 88V, 90R, 91D, 92A, 95R, 98L, 100Y, 102Y, 104N, 129R, 131M, 132W, 133S, 134Q, 135R
CDD
cd12378 (RRM1_I_PABPs)98LRNA binding site
58S, 60Y, 70E, 87R, 88V, 90R, 91D, 92A, 95R, 98L, 100Y, 102Y, 104N, 129R, 131M, 132W, 133S, 134Q, 135R
CDD
cd12378 (RRM1_I_PABPs)100YRNA binding site
58S, 60Y, 70E, 87R, 88V, 90R, 91D, 92A, 95R, 98L, 100Y, 102Y, 104N, 129R, 131M, 132W, 133S, 134Q, 135R
CDD
cd12378 (RRM1_I_PABPs)102YRNA binding site
58S, 60Y, 70E, 87R, 88V, 90R, 91D, 92A, 95R, 98L, 100Y, 102Y, 104N, 129R, 131M, 132W, 133S, 134Q, 135R
CDD
cd12378 (RRM1_I_PABPs)104NRNA binding site
58S, 60Y, 70E, 87R, 88V, 90R, 91D, 92A, 95R, 98L, 100Y, 102Y, 104N, 129R, 131M, 132W, 133S, 134Q, 135R
CDD
cd12378 (RRM1_I_PABPs)129RRNA binding site
58S, 60Y, 70E, 87R, 88V, 90R, 91D, 92A, 95R, 98L, 100Y, 102Y, 104N, 129R, 131M, 132W, 133S, 134Q, 135R
CDD
cd12378 (RRM1_I_PABPs)131MRNA binding site
58S, 60Y, 70E, 87R, 88V, 90R, 91D, 92A, 95R, 98L, 100Y, 102Y, 104N, 129R, 131M, 132W, 133S, 134Q, 135R
CDD
cd12378 (RRM1_I_PABPs)132WRNA binding site
58S, 60Y, 70E, 87R, 88V, 90R, 91D, 92A, 95R, 98L, 100Y, 102Y, 104N, 129R, 131M, 132W, 133S, 134Q, 135R
CDD
cd12378 (RRM1_I_PABPs)133SRNA binding site
58S, 60Y, 70E, 87R, 88V, 90R, 91D, 92A, 95R, 98L, 100Y, 102Y, 104N, 129R, 131M, 132W, 133S, 134Q, 135R
CDD
cd12378 (RRM1_I_PABPs)134QRNA binding site
58S, 60Y, 70E, 87R, 88V, 90R, 91D, 92A, 95R, 98L, 100Y, 102Y, 104N, 129R, 131M, 132W, 133S, 134Q, 135R
CDD
cd12378 (RRM1_I_PABPs)135RRNA binding site
58S, 60Y, 70E, 87R, 88V, 90R, 91D, 92A, 95R, 98L, 100Y, 102Y, 104N, 129R, 131M, 132W, 133S, 134Q, 135R
CDD
cd12378 (RRM1_I_PABPs) -
oligomer interface...69Toligomer interface
69T, 70E, 71A, 74F, 86I, 90R, 92A, 93V, 94T, 95R, 96R, 135R, 137P
CDD
cd12378 (RRM1_I_PABPs)70Eoligomer interface
69T, 70E, 71A, 74F, 86I, 90R, 92A, 93V, 94T, 95R, 96R, 135R, 137P
CDD
cd12378 (RRM1_I_PABPs)71Aoligomer interface
69T, 70E, 71A, 74F, 86I, 90R, 92A, 93V, 94T, 95R, 96R, 135R, 137P
CDD
cd12378 (RRM1_I_PABPs)74Foligomer interface
69T, 70E, 71A, 74F, 86I, 90R, 92A, 93V, 94T, 95R, 96R, 135R, 137P
CDD
cd12378 (RRM1_I_PABPs)86Ioligomer interface
69T, 70E, 71A, 74F, 86I, 90R, 92A, 93V, 94T, 95R, 96R, 135R, 137P
CDD
cd12378 (RRM1_I_PABPs)90Roligomer interface
69T, 70E, 71A, 74F, 86I, 90R, 92A, 93V, 94T, 95R, 96R, 135R, 137P
CDD
cd12378 (RRM1_I_PABPs)92Aoligomer interface
69T, 70E, 71A, 74F, 86I, 90R, 92A, 93V, 94T, 95R, 96R, 135R, 137P
CDD
cd12378 (RRM1_I_PABPs)93Voligomer interface
69T, 70E, 71A, 74F, 86I, 90R, 92A, 93V, 94T, 95R, 96R, 135R, 137P
CDD
cd12378 (RRM1_I_PABPs)94Toligomer interface
69T, 70E, 71A, 74F, 86I, 90R, 92A, 93V, 94T, 95R, 96R, 135R, 137P
CDD
cd12378 (RRM1_I_PABPs)95Roligomer interface
69T, 70E, 71A, 74F, 86I, 90R, 92A, 93V, 94T, 95R, 96R, 135R, 137P
CDD
cd12378 (RRM1_I_PABPs)96Roligomer interface
69T, 70E, 71A, 74F, 86I, 90R, 92A, 93V, 94T, 95R, 96R, 135R, 137P
CDD
cd12378 (RRM1_I_PABPs)135Roligomer interface
69T, 70E, 71A, 74F, 86I, 90R, 92A, 93V, 94T, 95R, 96R, 135R, 137P
CDD
cd12378 (RRM1_I_PABPs)137Poligomer interface
69T, 70E, 71A, 74F, 86I, 90R, 92A, 93V, 94T, 95R, 96R, 135R, 137P
CDD
cd12378 (RRM1_I_PABPs) -
RNA binding site c...146NRNA binding site
146N, 148F, 150K, 151N, 173S, 184K, 185G, 186Y, 188F, 190H, 215Y, 218H
CDD
cd12379 (RRM2_I_PABPs)148FRNA binding site
146N, 148F, 150K, 151N, 173S, 184K, 185G, 186Y, 188F, 190H, 215Y, 218H
CDD
cd12379 (RRM2_I_PABPs)150KRNA binding site
146N, 148F, 150K, 151N, 173S, 184K, 185G, 186Y, 188F, 190H, 215Y, 218H
CDD
cd12379 (RRM2_I_PABPs)151NRNA binding site
146N, 148F, 150K, 151N, 173S, 184K, 185G, 186Y, 188F, 190H, 215Y, 218H
CDD
cd12379 (RRM2_I_PABPs)173SRNA binding site
146N, 148F, 150K, 151N, 173S, 184K, 185G, 186Y, 188F, 190H, 215Y, 218H
CDD
cd12379 (RRM2_I_PABPs)184KRNA binding site
146N, 148F, 150K, 151N, 173S, 184K, 185G, 186Y, 188F, 190H, 215Y, 218H
CDD
cd12379 (RRM2_I_PABPs)185GRNA binding site
146N, 148F, 150K, 151N, 173S, 184K, 185G, 186Y, 188F, 190H, 215Y, 218H
CDD
cd12379 (RRM2_I_PABPs)186YRNA binding site
146N, 148F, 150K, 151N, 173S, 184K, 185G, 186Y, 188F, 190H, 215Y, 218H
CDD
cd12379 (RRM2_I_PABPs)188FRNA binding site
146N, 148F, 150K, 151N, 173S, 184K, 185G, 186Y, 188F, 190H, 215Y, 218H
CDD
cd12379 (RRM2_I_PABPs)190HRNA binding site
146N, 148F, 150K, 151N, 173S, 184K, 185G, 186Y, 188F, 190H, 215Y, 218H
CDD
cd12379 (RRM2_I_PABPs)215YRNA binding site
146N, 148F, 150K, 151N, 173S, 184K, 185G, 186Y, 188F, 190H, 215Y, 218H
CDD
cd12379 (RRM2_I_PABPs)218HRNA binding site
146N, 148F, 150K, 151N, 173S, 184K, 185G, 186Y, 188F, 190H, 215Y, 218H
CDD
cd12379 (RRM2_I_PABPs)
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0003676 nucleic acid binding
GO:0003723 RNA binding
Cellular Component
None predicted.