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Entry type
Status
Per-residue features
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Protein
GBC15409.1
Length
2,424 amino acids
Protein family membership
None predicted.
Domains and repeats
-
Domain289 - 450
- RNA recognition motif domain (IPR000504)
652 - 887- Endonuclease/exonuclease/phosphatase (IPR005135)
1,217 - 1,512- Reverse transcriptase domain (IPR000477)
1,972 - 2,120- Ribonuclease H-like domain (IPR012337)
- Ribonuclease H domain (IPR002156)
1
500
1000
1500
2000
2424
Detailed signature matches
no IPR
Unintegrated signatures
-
cd00590 (RRM_SF)381 - 448
-
cd01650 (RT_nLTR_like)1,231 - 1,512
-
mobidb-lite (disord...)1 - 166511 - 531619 - 644
Residue annotation
-
putative NTP bindi...1,320Dputative NTP binding site
1,320D, 1,321M, 1,322S, 1,323K, 1,324A, 1,325Y, 1,379Q, 1,435D
CDD
cd01650 (RT_nLTR_like)1,321Mputative NTP binding site
1,320D, 1,321M, 1,322S, 1,323K, 1,324A, 1,325Y, 1,379Q, 1,435D
CDD
cd01650 (RT_nLTR_like)1,322Sputative NTP binding site
1,320D, 1,321M, 1,322S, 1,323K, 1,324A, 1,325Y, 1,379Q, 1,435D
CDD
cd01650 (RT_nLTR_like)1,323Kputative NTP binding site
1,320D, 1,321M, 1,322S, 1,323K, 1,324A, 1,325Y, 1,379Q, 1,435D
CDD
cd01650 (RT_nLTR_like)1,324Aputative NTP binding site
1,320D, 1,321M, 1,322S, 1,323K, 1,324A, 1,325Y, 1,379Q, 1,435D
CDD
cd01650 (RT_nLTR_like)1,325Yputative NTP binding site
1,320D, 1,321M, 1,322S, 1,323K, 1,324A, 1,325Y, 1,379Q, 1,435D
CDD
cd01650 (RT_nLTR_like)1,379Qputative NTP binding site
1,320D, 1,321M, 1,322S, 1,323K, 1,324A, 1,325Y, 1,379Q, 1,435D
CDD
cd01650 (RT_nLTR_like)1,435Dputative NTP binding site
1,320D, 1,321M, 1,322S, 1,323K, 1,324A, 1,325Y, 1,379Q, 1,435D
CDD
cd01650 (RT_nLTR_like) -
putative active si...1,320Dputative active site
1,320D, 1,321M, 1,322S, 1,323K, 1,324A, 1,325Y, 1,379Q, 1,380G, 1,433Y, 1,435D, 1,436D, 1,508L, 1,509G
CDD
cd01650 (RT_nLTR_like)1,321Mputative active site
1,320D, 1,321M, 1,322S, 1,323K, 1,324A, 1,325Y, 1,379Q, 1,380G, 1,433Y, 1,435D, 1,436D, 1,508L, 1,509G
CDD
cd01650 (RT_nLTR_like)1,322Sputative active site
1,320D, 1,321M, 1,322S, 1,323K, 1,324A, 1,325Y, 1,379Q, 1,380G, 1,433Y, 1,435D, 1,436D, 1,508L, 1,509G
CDD
cd01650 (RT_nLTR_like)1,323Kputative active site
1,320D, 1,321M, 1,322S, 1,323K, 1,324A, 1,325Y, 1,379Q, 1,380G, 1,433Y, 1,435D, 1,436D, 1,508L, 1,509G
CDD
cd01650 (RT_nLTR_like)1,324Aputative active site
1,320D, 1,321M, 1,322S, 1,323K, 1,324A, 1,325Y, 1,379Q, 1,380G, 1,433Y, 1,435D, 1,436D, 1,508L, 1,509G
CDD
cd01650 (RT_nLTR_like)1,325Yputative active site
1,320D, 1,321M, 1,322S, 1,323K, 1,324A, 1,325Y, 1,379Q, 1,380G, 1,433Y, 1,435D, 1,436D, 1,508L, 1,509G
CDD
cd01650 (RT_nLTR_like)1,379Qputative active site
1,320D, 1,321M, 1,322S, 1,323K, 1,324A, 1,325Y, 1,379Q, 1,380G, 1,433Y, 1,435D, 1,436D, 1,508L, 1,509G
CDD
cd01650 (RT_nLTR_like)1,380Gputative active site
1,320D, 1,321M, 1,322S, 1,323K, 1,324A, 1,325Y, 1,379Q, 1,380G, 1,433Y, 1,435D, 1,436D, 1,508L, 1,509G
CDD
cd01650 (RT_nLTR_like)1,433Yputative active site
1,320D, 1,321M, 1,322S, 1,323K, 1,324A, 1,325Y, 1,379Q, 1,380G, 1,433Y, 1,435D, 1,436D, 1,508L, 1,509G
CDD
cd01650 (RT_nLTR_like)1,435Dputative active site
1,320D, 1,321M, 1,322S, 1,323K, 1,324A, 1,325Y, 1,379Q, 1,380G, 1,433Y, 1,435D, 1,436D, 1,508L, 1,509G
CDD
cd01650 (RT_nLTR_like)1,436Dputative active site
1,320D, 1,321M, 1,322S, 1,323K, 1,324A, 1,325Y, 1,379Q, 1,380G, 1,433Y, 1,435D, 1,436D, 1,508L, 1,509G
CDD
cd01650 (RT_nLTR_like)1,508Lputative active site
1,320D, 1,321M, 1,322S, 1,323K, 1,324A, 1,325Y, 1,379Q, 1,380G, 1,433Y, 1,435D, 1,436D, 1,508L, 1,509G
CDD
cd01650 (RT_nLTR_like)1,509Gputative active site
1,320D, 1,321M, 1,322S, 1,323K, 1,324A, 1,325Y, 1,379Q, 1,380G, 1,433Y, 1,435D, 1,436D, 1,508L, 1,509G
CDD
cd01650 (RT_nLTR_like) -
putative nucleic a...1,380G
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0003676 nucleic acid binding
GO:0004523 RNA-DNA hybrid ribonuclease activity
Cellular Component
None predicted.