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Entry type
Status
Per-residue features
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Protein
GBC15315.1
Length
922 amino acids
Protein family membership
None predicted.
Domains and repeats
-
Domain195 - 374
- Reverse transcriptase domain (IPR000477)
568 - 607- Zinc finger, H2C2-type, histone UAS binding (IPR015416)
622 - 791- Ribonuclease H-like domain (IPR012337)
- Integrase, catalytic core (IPR001584)
1
100
200
300
400
500
600
700
800
922
Detailed signature matches
no IPR
Unintegrated signatures
-
SSF56672 (DNA/RNA p...)139 - 538
-
cd01647 (RT_LTR)199 - 374
-
cd09274 (RNase_HI_R...)437 - 551
-
mobidb-lite (disord...)77 - 112
Residue annotation
-
putative NTP bindi...261D262L263A264S265G266Y295F325D
-
putative active si...261Dputative active site
261D, 262L, 263A, 264S, 265G, 266Y, 295F, 296G, 323Y, 325D, 326D, 370L, 371E
CDD
cd01647 (RT_LTR)262Lputative active site
261D, 262L, 263A, 264S, 265G, 266Y, 295F, 296G, 323Y, 325D, 326D, 370L, 371E
CDD
cd01647 (RT_LTR)263Aputative active site
261D, 262L, 263A, 264S, 265G, 266Y, 295F, 296G, 323Y, 325D, 326D, 370L, 371E
CDD
cd01647 (RT_LTR)264Sputative active site
261D, 262L, 263A, 264S, 265G, 266Y, 295F, 296G, 323Y, 325D, 326D, 370L, 371E
CDD
cd01647 (RT_LTR)265Gputative active site
261D, 262L, 263A, 264S, 265G, 266Y, 295F, 296G, 323Y, 325D, 326D, 370L, 371E
CDD
cd01647 (RT_LTR)266Yputative active site
261D, 262L, 263A, 264S, 265G, 266Y, 295F, 296G, 323Y, 325D, 326D, 370L, 371E
CDD
cd01647 (RT_LTR)295Fputative active site
261D, 262L, 263A, 264S, 265G, 266Y, 295F, 296G, 323Y, 325D, 326D, 370L, 371E
CDD
cd01647 (RT_LTR)296Gputative active site
261D, 262L, 263A, 264S, 265G, 266Y, 295F, 296G, 323Y, 325D, 326D, 370L, 371E
CDD
cd01647 (RT_LTR)323Yputative active site
261D, 262L, 263A, 264S, 265G, 266Y, 295F, 296G, 323Y, 325D, 326D, 370L, 371E
CDD
cd01647 (RT_LTR)325Dputative active site
261D, 262L, 263A, 264S, 265G, 266Y, 295F, 296G, 323Y, 325D, 326D, 370L, 371E
CDD
cd01647 (RT_LTR)326Dputative active site
261D, 262L, 263A, 264S, 265G, 266Y, 295F, 296G, 323Y, 325D, 326D, 370L, 371E
CDD
cd01647 (RT_LTR)370Lputative active site
261D, 262L, 263A, 264S, 265G, 266Y, 295F, 296G, 323Y, 325D, 326D, 370L, 371E
CDD
cd01647 (RT_LTR)371Eputative active site
261D, 262L, 263A, 264S, 265G, 266Y, 295F, 296G, 323Y, 325D, 326D, 370L, 371E
CDD
cd01647 (RT_LTR) -
putative nucleic a...296G
-
RNA/DNA hybrid bin...437ARNA/DNA hybrid binding site
437A, 438S, 439G, 473P, 474I, 475T, 478E, 503D, 537H, 551R
CDD
cd09274 (RNase_HI_RT_Ty3)438SRNA/DNA hybrid binding site
437A, 438S, 439G, 473P, 474I, 475T, 478E, 503D, 537H, 551R
CDD
cd09274 (RNase_HI_RT_Ty3)439GRNA/DNA hybrid binding site
437A, 438S, 439G, 473P, 474I, 475T, 478E, 503D, 537H, 551R
CDD
cd09274 (RNase_HI_RT_Ty3)473PRNA/DNA hybrid binding site
437A, 438S, 439G, 473P, 474I, 475T, 478E, 503D, 537H, 551R
CDD
cd09274 (RNase_HI_RT_Ty3)474IRNA/DNA hybrid binding site
437A, 438S, 439G, 473P, 474I, 475T, 478E, 503D, 537H, 551R
CDD
cd09274 (RNase_HI_RT_Ty3)475TRNA/DNA hybrid binding site
437A, 438S, 439G, 473P, 474I, 475T, 478E, 503D, 537H, 551R
CDD
cd09274 (RNase_HI_RT_Ty3)478ERNA/DNA hybrid binding site
437A, 438S, 439G, 473P, 474I, 475T, 478E, 503D, 537H, 551R
CDD
cd09274 (RNase_HI_RT_Ty3)503DRNA/DNA hybrid binding site
437A, 438S, 439G, 473P, 474I, 475T, 478E, 503D, 537H, 551R
CDD
cd09274 (RNase_HI_RT_Ty3)537HRNA/DNA hybrid binding site
437A, 438S, 439G, 473P, 474I, 475T, 478E, 503D, 537H, 551R
CDD
cd09274 (RNase_HI_RT_Ty3)551RRNA/DNA hybrid binding site
437A, 438S, 439G, 473P, 474I, 475T, 478E, 503D, 537H, 551R
CDD
cd09274 (RNase_HI_RT_Ty3)
GO term prediction
Biological Process
GO:0015074 DNA integration
Molecular Function
GO:0003676 nucleic acid binding
Cellular Component
None predicted.