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Protein

GBC13490.1

Length

1,153 amino acids

Protein family membership

DNA-directed RNA polymerase, subunit 2 (IPR015712)

Domains and repeats

Domain
Domain

1 200 400 600 800 1000 1153

Detailed signature matches

IPR015712

DNA-directed RNA polymerase, subunit 2
1. cd00653 (RNA_pol_B_...)
IPR007644

RNA polymerase, beta subunit, protrusion
1. PF04563 (RNA_pol_Rp...)
IPR007642

RNA polymerase Rpb2, domain 2
1. PF04561 (RNA_pol_Rp...)
IPR007646

RNA polymerase Rpb2, domain 4
1. PF04566 (RNA_pol_Rp...)
IPR007647

RNA polymerase Rpb2, domain 5
1. PF04567 (RNA_pol_Rp...)
IPR007120

DNA-directed RNA polymerase, subunit 2, domain 6
1. PF00562 (RNA_pol_Rp...)
IPR007641

RNA polymerase Rpb2, domain 7
1. PF04560 (RNA_pol_Rp...)
IPR007121

RNA polymerase, beta subunit, conserved site
1. PS01166 (RNA_POL_BETA)

no IPR

Unintegrated signatures

SSF64484 (beta and ...)

Residue annotation

RPB12 interaction ...
RPB1 interaction s...

1,078V

RPB1 interaction site
496G, 498R, 499A, 500L, 502I, 673E, 691H, 692H, 693N, 695S, 758V, 759M, 760S, 761Y, 764Y, 766I, 767E, 768D, 926K, 928V, 930G, 952N, 954H, 957P, 960M, 965M, 969L, 986F, 1,013S, 1,021S, 1,022A, 1,023Y, 1,025F, 1,038V, 1,041K, 1,042M, 1,043H, 1,045R, 1,046A, 1,067L, 1,068R, 1,069L, 1,073E, 1,075D, 1,076C, 1,078V, 1,080Y, 1,081G, 1,082A, 1,083S, 1,084M, 1,085L, 1,087M, 1,088E, 1,089R, 1,090L, 1,091M, 1,092I, 1,096Q, 1,129P, 1,133K, 1,135L, 1,137Q, 1,138E, 1,140Q, 1,142M, 1,143N, 1,144I, 1,145A, 1,147R, 1,149I
CDD
cd00653 (RNA_pol_B_RPB2)

1,080Y

RPB1 interaction site
496G, 498R, 499A, 500L, 502I, 673E, 691H, 692H, 693N, 695S, 758V, 759M, 760S, 761Y, 764Y, 766I, 767E, 768D, 926K, 928V, 930G, 952N, 954H, 957P, 960M, 965M, 969L, 986F, 1,013S, 1,021S, 1,022A, 1,023Y, 1,025F, 1,038V, 1,041K, 1,042M, 1,043H, 1,045R, 1,046A, 1,067L, 1,068R, 1,069L, 1,073E, 1,075D, 1,076C, 1,078V, 1,080Y, 1,081G, 1,082A, 1,083S, 1,084M, 1,085L, 1,087M, 1,088E, 1,089R, 1,090L, 1,091M, 1,092I, 1,096Q, 1,129P, 1,133K, 1,135L, 1,137Q, 1,138E, 1,140Q, 1,142M, 1,143N, 1,144I, 1,145A, 1,147R, 1,149I
CDD
cd00653 (RNA_pol_B_RPB2)

1,081G

RPB1 interaction site
496G, 498R, 499A, 500L, 502I, 673E, 691H, 692H, 693N, 695S, 758V, 759M, 760S, 761Y, 764Y, 766I, 767E, 768D, 926K, 928V, 930G, 952N, 954H, 957P, 960M, 965M, 969L, 986F, 1,013S, 1,021S, 1,022A, 1,023Y, 1,025F, 1,038V, 1,041K, 1,042M, 1,043H, 1,045R, 1,046A, 1,067L, 1,068R, 1,069L, 1,073E, 1,075D, 1,076C, 1,078V, 1,080Y, 1,081G, 1,082A, 1,083S, 1,084M, 1,085L, 1,087M, 1,088E, 1,089R, 1,090L, 1,091M, 1,092I, 1,096Q, 1,129P, 1,133K, 1,135L, 1,137Q, 1,138E, 1,140Q, 1,142M, 1,143N, 1,144I, 1,145A, 1,147R, 1,149I
CDD
cd00653 (RNA_pol_B_RPB2)

1,082A

RPB1 interaction site
496G, 498R, 499A, 500L, 502I, 673E, 691H, 692H, 693N, 695S, 758V, 759M, 760S, 761Y, 764Y, 766I, 767E, 768D, 926K, 928V, 930G, 952N, 954H, 957P, 960M, 965M, 969L, 986F, 1,013S, 1,021S, 1,022A, 1,023Y, 1,025F, 1,038V, 1,041K, 1,042M, 1,043H, 1,045R, 1,046A, 1,067L, 1,068R, 1,069L, 1,073E, 1,075D, 1,076C, 1,078V, 1,080Y, 1,081G, 1,082A, 1,083S, 1,084M, 1,085L, 1,087M, 1,088E, 1,089R, 1,090L, 1,091M, 1,092I, 1,096Q, 1,129P, 1,133K, 1,135L, 1,137Q, 1,138E, 1,140Q, 1,142M, 1,143N, 1,144I, 1,145A, 1,147R, 1,149I
CDD
cd00653 (RNA_pol_B_RPB2)

1,083S

RPB1 interaction site
496G, 498R, 499A, 500L, 502I, 673E, 691H, 692H, 693N, 695S, 758V, 759M, 760S, 761Y, 764Y, 766I, 767E, 768D, 926K, 928V, 930G, 952N, 954H, 957P, 960M, 965M, 969L, 986F, 1,013S, 1,021S, 1,022A, 1,023Y, 1,025F, 1,038V, 1,041K, 1,042M, 1,043H, 1,045R, 1,046A, 1,067L, 1,068R, 1,069L, 1,073E, 1,075D, 1,076C, 1,078V, 1,080Y, 1,081G, 1,082A, 1,083S, 1,084M, 1,085L, 1,087M, 1,088E, 1,089R, 1,090L, 1,091M, 1,092I, 1,096Q, 1,129P, 1,133K, 1,135L, 1,137Q, 1,138E, 1,140Q, 1,142M, 1,143N, 1,144I, 1,145A, 1,147R, 1,149I
CDD
cd00653 (RNA_pol_B_RPB2)

1,084M

RPB1 interaction site
496G, 498R, 499A, 500L, 502I, 673E, 691H, 692H, 693N, 695S, 758V, 759M, 760S, 761Y, 764Y, 766I, 767E, 768D, 926K, 928V, 930G, 952N, 954H, 957P, 960M, 965M, 969L, 986F, 1,013S, 1,021S, 1,022A, 1,023Y, 1,025F, 1,038V, 1,041K, 1,042M, 1,043H, 1,045R, 1,046A, 1,067L, 1,068R, 1,069L, 1,073E, 1,075D, 1,076C, 1,078V, 1,080Y, 1,081G, 1,082A, 1,083S, 1,084M, 1,085L, 1,087M, 1,088E, 1,089R, 1,090L, 1,091M, 1,092I, 1,096Q, 1,129P, 1,133K, 1,135L, 1,137Q, 1,138E, 1,140Q, 1,142M, 1,143N, 1,144I, 1,145A, 1,147R, 1,149I
CDD
cd00653 (RNA_pol_B_RPB2)

1,085L

RPB1 interaction site
496G, 498R, 499A, 500L, 502I, 673E, 691H, 692H, 693N, 695S, 758V, 759M, 760S, 761Y, 764Y, 766I, 767E, 768D, 926K, 928V, 930G, 952N, 954H, 957P, 960M, 965M, 969L, 986F, 1,013S, 1,021S, 1,022A, 1,023Y, 1,025F, 1,038V, 1,041K, 1,042M, 1,043H, 1,045R, 1,046A, 1,067L, 1,068R, 1,069L, 1,073E, 1,075D, 1,076C, 1,078V, 1,080Y, 1,081G, 1,082A, 1,083S, 1,084M, 1,085L, 1,087M, 1,088E, 1,089R, 1,090L, 1,091M, 1,092I, 1,096Q, 1,129P, 1,133K, 1,135L, 1,137Q, 1,138E, 1,140Q, 1,142M, 1,143N, 1,144I, 1,145A, 1,147R, 1,149I
CDD
cd00653 (RNA_pol_B_RPB2)

1,087M

RPB1 interaction site
496G, 498R, 499A, 500L, 502I, 673E, 691H, 692H, 693N, 695S, 758V, 759M, 760S, 761Y, 764Y, 766I, 767E, 768D, 926K, 928V, 930G, 952N, 954H, 957P, 960M, 965M, 969L, 986F, 1,013S, 1,021S, 1,022A, 1,023Y, 1,025F, 1,038V, 1,041K, 1,042M, 1,043H, 1,045R, 1,046A, 1,067L, 1,068R, 1,069L, 1,073E, 1,075D, 1,076C, 1,078V, 1,080Y, 1,081G, 1,082A, 1,083S, 1,084M, 1,085L, 1,087M, 1,088E, 1,089R, 1,090L, 1,091M, 1,092I, 1,096Q, 1,129P, 1,133K, 1,135L, 1,137Q, 1,138E, 1,140Q, 1,142M, 1,143N, 1,144I, 1,145A, 1,147R, 1,149I
CDD
cd00653 (RNA_pol_B_RPB2)

1,088E

RPB1 interaction site
496G, 498R, 499A, 500L, 502I, 673E, 691H, 692H, 693N, 695S, 758V, 759M, 760S, 761Y, 764Y, 766I, 767E, 768D, 926K, 928V, 930G, 952N, 954H, 957P, 960M, 965M, 969L, 986F, 1,013S, 1,021S, 1,022A, 1,023Y, 1,025F, 1,038V, 1,041K, 1,042M, 1,043H, 1,045R, 1,046A, 1,067L, 1,068R, 1,069L, 1,073E, 1,075D, 1,076C, 1,078V, 1,080Y, 1,081G, 1,082A, 1,083S, 1,084M, 1,085L, 1,087M, 1,088E, 1,089R, 1,090L, 1,091M, 1,092I, 1,096Q, 1,129P, 1,133K, 1,135L, 1,137Q, 1,138E, 1,140Q, 1,142M, 1,143N, 1,144I, 1,145A, 1,147R, 1,149I
CDD
cd00653 (RNA_pol_B_RPB2)

1,089R

RPB1 interaction site
496G, 498R, 499A, 500L, 502I, 673E, 691H, 692H, 693N, 695S, 758V, 759M, 760S, 761Y, 764Y, 766I, 767E, 768D, 926K, 928V, 930G, 952N, 954H, 957P, 960M, 965M, 969L, 986F, 1,013S, 1,021S, 1,022A, 1,023Y, 1,025F, 1,038V, 1,041K, 1,042M, 1,043H, 1,045R, 1,046A, 1,067L, 1,068R, 1,069L, 1,073E, 1,075D, 1,076C, 1,078V, 1,080Y, 1,081G, 1,082A, 1,083S, 1,084M, 1,085L, 1,087M, 1,088E, 1,089R, 1,090L, 1,091M, 1,092I, 1,096Q, 1,129P, 1,133K, 1,135L, 1,137Q, 1,138E, 1,140Q, 1,142M, 1,143N, 1,144I, 1,145A, 1,147R, 1,149I
CDD
cd00653 (RNA_pol_B_RPB2)

1,090L

RPB1 interaction site
496G, 498R, 499A, 500L, 502I, 673E, 691H, 692H, 693N, 695S, 758V, 759M, 760S, 761Y, 764Y, 766I, 767E, 768D, 926K, 928V, 930G, 952N, 954H, 957P, 960M, 965M, 969L, 986F, 1,013S, 1,021S, 1,022A, 1,023Y, 1,025F, 1,038V, 1,041K, 1,042M, 1,043H, 1,045R, 1,046A, 1,067L, 1,068R, 1,069L, 1,073E, 1,075D, 1,076C, 1,078V, 1,080Y, 1,081G, 1,082A, 1,083S, 1,084M, 1,085L, 1,087M, 1,088E, 1,089R, 1,090L, 1,091M, 1,092I, 1,096Q, 1,129P, 1,133K, 1,135L, 1,137Q, 1,138E, 1,140Q, 1,142M, 1,143N, 1,144I, 1,145A, 1,147R, 1,149I
CDD
cd00653 (RNA_pol_B_RPB2)

1,091M

RPB1 interaction site
496G, 498R, 499A, 500L, 502I, 673E, 691H, 692H, 693N, 695S, 758V, 759M, 760S, 761Y, 764Y, 766I, 767E, 768D, 926K, 928V, 930G, 952N, 954H, 957P, 960M, 965M, 969L, 986F, 1,013S, 1,021S, 1,022A, 1,023Y, 1,025F, 1,038V, 1,041K, 1,042M, 1,043H, 1,045R, 1,046A, 1,067L, 1,068R, 1,069L, 1,073E, 1,075D, 1,076C, 1,078V, 1,080Y, 1,081G, 1,082A, 1,083S, 1,084M, 1,085L, 1,087M, 1,088E, 1,089R, 1,090L, 1,091M, 1,092I, 1,096Q, 1,129P, 1,133K, 1,135L, 1,137Q, 1,138E, 1,140Q, 1,142M, 1,143N, 1,144I, 1,145A, 1,147R, 1,149I
CDD
cd00653 (RNA_pol_B_RPB2)

1,092I

RPB1 interaction site
496G, 498R, 499A, 500L, 502I, 673E, 691H, 692H, 693N, 695S, 758V, 759M, 760S, 761Y, 764Y, 766I, 767E, 768D, 926K, 928V, 930G, 952N, 954H, 957P, 960M, 965M, 969L, 986F, 1,013S, 1,021S, 1,022A, 1,023Y, 1,025F, 1,038V, 1,041K, 1,042M, 1,043H, 1,045R, 1,046A, 1,067L, 1,068R, 1,069L, 1,073E, 1,075D, 1,076C, 1,078V, 1,080Y, 1,081G, 1,082A, 1,083S, 1,084M, 1,085L, 1,087M, 1,088E, 1,089R, 1,090L, 1,091M, 1,092I, 1,096Q, 1,129P, 1,133K, 1,135L, 1,137Q, 1,138E, 1,140Q, 1,142M, 1,143N, 1,144I, 1,145A, 1,147R, 1,149I
CDD
cd00653 (RNA_pol_B_RPB2)

1,096Q

RPB1 interaction site
496G, 498R, 499A, 500L, 502I, 673E, 691H, 692H, 693N, 695S, 758V, 759M, 760S, 761Y, 764Y, 766I, 767E, 768D, 926K, 928V, 930G, 952N, 954H, 957P, 960M, 965M, 969L, 986F, 1,013S, 1,021S, 1,022A, 1,023Y, 1,025F, 1,038V, 1,041K, 1,042M, 1,043H, 1,045R, 1,046A, 1,067L, 1,068R, 1,069L, 1,073E, 1,075D, 1,076C, 1,078V, 1,080Y, 1,081G, 1,082A, 1,083S, 1,084M, 1,085L, 1,087M, 1,088E, 1,089R, 1,090L, 1,091M, 1,092I, 1,096Q, 1,129P, 1,133K, 1,135L, 1,137Q, 1,138E, 1,140Q, 1,142M, 1,143N, 1,144I, 1,145A, 1,147R, 1,149I
CDD
cd00653 (RNA_pol_B_RPB2)

1,129P

RPB1 interaction site
496G, 498R, 499A, 500L, 502I, 673E, 691H, 692H, 693N, 695S, 758V, 759M, 760S, 761Y, 764Y, 766I, 767E, 768D, 926K, 928V, 930G, 952N, 954H, 957P, 960M, 965M, 969L, 986F, 1,013S, 1,021S, 1,022A, 1,023Y, 1,025F, 1,038V, 1,041K, 1,042M, 1,043H, 1,045R, 1,046A, 1,067L, 1,068R, 1,069L, 1,073E, 1,075D, 1,076C, 1,078V, 1,080Y, 1,081G, 1,082A, 1,083S, 1,084M, 1,085L, 1,087M, 1,088E, 1,089R, 1,090L, 1,091M, 1,092I, 1,096Q, 1,129P, 1,133K, 1,135L, 1,137Q, 1,138E, 1,140Q, 1,142M, 1,143N, 1,144I, 1,145A, 1,147R, 1,149I
CDD
cd00653 (RNA_pol_B_RPB2)

1,133K

RPB1 interaction site
496G, 498R, 499A, 500L, 502I, 673E, 691H, 692H, 693N, 695S, 758V, 759M, 760S, 761Y, 764Y, 766I, 767E, 768D, 926K, 928V, 930G, 952N, 954H, 957P, 960M, 965M, 969L, 986F, 1,013S, 1,021S, 1,022A, 1,023Y, 1,025F, 1,038V, 1,041K, 1,042M, 1,043H, 1,045R, 1,046A, 1,067L, 1,068R, 1,069L, 1,073E, 1,075D, 1,076C, 1,078V, 1,080Y, 1,081G, 1,082A, 1,083S, 1,084M, 1,085L, 1,087M, 1,088E, 1,089R, 1,090L, 1,091M, 1,092I, 1,096Q, 1,129P, 1,133K, 1,135L, 1,137Q, 1,138E, 1,140Q, 1,142M, 1,143N, 1,144I, 1,145A, 1,147R, 1,149I
CDD
cd00653 (RNA_pol_B_RPB2)

1,135L

RPB1 interaction site
496G, 498R, 499A, 500L, 502I, 673E, 691H, 692H, 693N, 695S, 758V, 759M, 760S, 761Y, 764Y, 766I, 767E, 768D, 926K, 928V, 930G, 952N, 954H, 957P, 960M, 965M, 969L, 986F, 1,013S, 1,021S, 1,022A, 1,023Y, 1,025F, 1,038V, 1,041K, 1,042M, 1,043H, 1,045R, 1,046A, 1,067L, 1,068R, 1,069L, 1,073E, 1,075D, 1,076C, 1,078V, 1,080Y, 1,081G, 1,082A, 1,083S, 1,084M, 1,085L, 1,087M, 1,088E, 1,089R, 1,090L, 1,091M, 1,092I, 1,096Q, 1,129P, 1,133K, 1,135L, 1,137Q, 1,138E, 1,140Q, 1,142M, 1,143N, 1,144I, 1,145A, 1,147R, 1,149I
CDD
cd00653 (RNA_pol_B_RPB2)

1,137Q

RPB1 interaction site
496G, 498R, 499A, 500L, 502I, 673E, 691H, 692H, 693N, 695S, 758V, 759M, 760S, 761Y, 764Y, 766I, 767E, 768D, 926K, 928V, 930G, 952N, 954H, 957P, 960M, 965M, 969L, 986F, 1,013S, 1,021S, 1,022A, 1,023Y, 1,025F, 1,038V, 1,041K, 1,042M, 1,043H, 1,045R, 1,046A, 1,067L, 1,068R, 1,069L, 1,073E, 1,075D, 1,076C, 1,078V, 1,080Y, 1,081G, 1,082A, 1,083S, 1,084M, 1,085L, 1,087M, 1,088E, 1,089R, 1,090L, 1,091M, 1,092I, 1,096Q, 1,129P, 1,133K, 1,135L, 1,137Q, 1,138E, 1,140Q, 1,142M, 1,143N, 1,144I, 1,145A, 1,147R, 1,149I
CDD
cd00653 (RNA_pol_B_RPB2)

1,138E

RPB1 interaction site
496G, 498R, 499A, 500L, 502I, 673E, 691H, 692H, 693N, 695S, 758V, 759M, 760S, 761Y, 764Y, 766I, 767E, 768D, 926K, 928V, 930G, 952N, 954H, 957P, 960M, 965M, 969L, 986F, 1,013S, 1,021S, 1,022A, 1,023Y, 1,025F, 1,038V, 1,041K, 1,042M, 1,043H, 1,045R, 1,046A, 1,067L, 1,068R, 1,069L, 1,073E, 1,075D, 1,076C, 1,078V, 1,080Y, 1,081G, 1,082A, 1,083S, 1,084M, 1,085L, 1,087M, 1,088E, 1,089R, 1,090L, 1,091M, 1,092I, 1,096Q, 1,129P, 1,133K, 1,135L, 1,137Q, 1,138E, 1,140Q, 1,142M, 1,143N, 1,144I, 1,145A, 1,147R, 1,149I
CDD
cd00653 (RNA_pol_B_RPB2)

1,140Q

RPB1 interaction site
496G, 498R, 499A, 500L, 502I, 673E, 691H, 692H, 693N, 695S, 758V, 759M, 760S, 761Y, 764Y, 766I, 767E, 768D, 926K, 928V, 930G, 952N, 954H, 957P, 960M, 965M, 969L, 986F, 1,013S, 1,021S, 1,022A, 1,023Y, 1,025F, 1,038V, 1,041K, 1,042M, 1,043H, 1,045R, 1,046A, 1,067L, 1,068R, 1,069L, 1,073E, 1,075D, 1,076C, 1,078V, 1,080Y, 1,081G, 1,082A, 1,083S, 1,084M, 1,085L, 1,087M, 1,088E, 1,089R, 1,090L, 1,091M, 1,092I, 1,096Q, 1,129P, 1,133K, 1,135L, 1,137Q, 1,138E, 1,140Q, 1,142M, 1,143N, 1,144I, 1,145A, 1,147R, 1,149I
CDD
cd00653 (RNA_pol_B_RPB2)

1,142M

RPB1 interaction site
496G, 498R, 499A, 500L, 502I, 673E, 691H, 692H, 693N, 695S, 758V, 759M, 760S, 761Y, 764Y, 766I, 767E, 768D, 926K, 928V, 930G, 952N, 954H, 957P, 960M, 965M, 969L, 986F, 1,013S, 1,021S, 1,022A, 1,023Y, 1,025F, 1,038V, 1,041K, 1,042M, 1,043H, 1,045R, 1,046A, 1,067L, 1,068R, 1,069L, 1,073E, 1,075D, 1,076C, 1,078V, 1,080Y, 1,081G, 1,082A, 1,083S, 1,084M, 1,085L, 1,087M, 1,088E, 1,089R, 1,090L, 1,091M, 1,092I, 1,096Q, 1,129P, 1,133K, 1,135L, 1,137Q, 1,138E, 1,140Q, 1,142M, 1,143N, 1,144I, 1,145A, 1,147R, 1,149I
CDD
cd00653 (RNA_pol_B_RPB2)

1,143N

RPB1 interaction site
496G, 498R, 499A, 500L, 502I, 673E, 691H, 692H, 693N, 695S, 758V, 759M, 760S, 761Y, 764Y, 766I, 767E, 768D, 926K, 928V, 930G, 952N, 954H, 957P, 960M, 965M, 969L, 986F, 1,013S, 1,021S, 1,022A, 1,023Y, 1,025F, 1,038V, 1,041K, 1,042M, 1,043H, 1,045R, 1,046A, 1,067L, 1,068R, 1,069L, 1,073E, 1,075D, 1,076C, 1,078V, 1,080Y, 1,081G, 1,082A, 1,083S, 1,084M, 1,085L, 1,087M, 1,088E, 1,089R, 1,090L, 1,091M, 1,092I, 1,096Q, 1,129P, 1,133K, 1,135L, 1,137Q, 1,138E, 1,140Q, 1,142M, 1,143N, 1,144I, 1,145A, 1,147R, 1,149I
CDD
cd00653 (RNA_pol_B_RPB2)

1,144I

RPB1 interaction site
496G, 498R, 499A, 500L, 502I, 673E, 691H, 692H, 693N, 695S, 758V, 759M, 760S, 761Y, 764Y, 766I, 767E, 768D, 926K, 928V, 930G, 952N, 954H, 957P, 960M, 965M, 969L, 986F, 1,013S, 1,021S, 1,022A, 1,023Y, 1,025F, 1,038V, 1,041K, 1,042M, 1,043H, 1,045R, 1,046A, 1,067L, 1,068R, 1,069L, 1,073E, 1,075D, 1,076C, 1,078V, 1,080Y, 1,081G, 1,082A, 1,083S, 1,084M, 1,085L, 1,087M, 1,088E, 1,089R, 1,090L, 1,091M, 1,092I, 1,096Q, 1,129P, 1,133K, 1,135L, 1,137Q, 1,138E, 1,140Q, 1,142M, 1,143N, 1,144I, 1,145A, 1,147R, 1,149I
CDD
cd00653 (RNA_pol_B_RPB2)

1,145A

RPB1 interaction site
496G, 498R, 499A, 500L, 502I, 673E, 691H, 692H, 693N, 695S, 758V, 759M, 760S, 761Y, 764Y, 766I, 767E, 768D, 926K, 928V, 930G, 952N, 954H, 957P, 960M, 965M, 969L, 986F, 1,013S, 1,021S, 1,022A, 1,023Y, 1,025F, 1,038V, 1,041K, 1,042M, 1,043H, 1,045R, 1,046A, 1,067L, 1,068R, 1,069L, 1,073E, 1,075D, 1,076C, 1,078V, 1,080Y, 1,081G, 1,082A, 1,083S, 1,084M, 1,085L, 1,087M, 1,088E, 1,089R, 1,090L, 1,091M, 1,092I, 1,096Q, 1,129P, 1,133K, 1,135L, 1,137Q, 1,138E, 1,140Q, 1,142M, 1,143N, 1,144I, 1,145A, 1,147R, 1,149I
CDD
cd00653 (RNA_pol_B_RPB2)

1,147R

RPB1 interaction site
496G, 498R, 499A, 500L, 502I, 673E, 691H, 692H, 693N, 695S, 758V, 759M, 760S, 761Y, 764Y, 766I, 767E, 768D, 926K, 928V, 930G, 952N, 954H, 957P, 960M, 965M, 969L, 986F, 1,013S, 1,021S, 1,022A, 1,023Y, 1,025F, 1,038V, 1,041K, 1,042M, 1,043H, 1,045R, 1,046A, 1,067L, 1,068R, 1,069L, 1,073E, 1,075D, 1,076C, 1,078V, 1,080Y, 1,081G, 1,082A, 1,083S, 1,084M, 1,085L, 1,087M, 1,088E, 1,089R, 1,090L, 1,091M, 1,092I, 1,096Q, 1,129P, 1,133K, 1,135L, 1,137Q, 1,138E, 1,140Q, 1,142M, 1,143N, 1,144I, 1,145A, 1,147R, 1,149I
CDD
cd00653 (RNA_pol_B_RPB2)

1,149I

RPB1 interaction site
496G, 498R, 499A, 500L, 502I, 673E, 691H, 692H, 693N, 695S, 758V, 759M, 760S, 761Y, 764Y, 766I, 767E, 768D, 926K, 928V, 930G, 952N, 954H, 957P, 960M, 965M, 969L, 986F, 1,013S, 1,021S, 1,022A, 1,023Y, 1,025F, 1,038V, 1,041K, 1,042M, 1,043H, 1,045R, 1,046A, 1,067L, 1,068R, 1,069L, 1,073E, 1,075D, 1,076C, 1,078V, 1,080Y, 1,081G, 1,082A, 1,083S, 1,084M, 1,085L, 1,087M, 1,088E, 1,089R, 1,090L, 1,091M, 1,092I, 1,096Q, 1,129P, 1,133K, 1,135L, 1,137Q, 1,138E, 1,140Q, 1,142M, 1,143N, 1,144I, 1,145A, 1,147R, 1,149I
CDD
cd00653 (RNA_pol_B_RPB2)
RPB10 interaction ...

731Q

RPB10 interaction site
731Q, 732Q, 753N, 755I, 776S, 779R, 935Q, 948D, 975V, 976L, 978G, 1,009D, 1,026F
CDD
cd00653 (RNA_pol_B_RPB2)

732Q

RPB10 interaction site
731Q, 732Q, 753N, 755I, 776S, 779R, 935Q, 948D, 975V, 976L, 978G, 1,009D, 1,026F
CDD
cd00653 (RNA_pol_B_RPB2)

753N

RPB10 interaction site
731Q, 732Q, 753N, 755I, 776S, 779R, 935Q, 948D, 975V, 976L, 978G, 1,009D, 1,026F
CDD
cd00653 (RNA_pol_B_RPB2)

755I

RPB10 interaction site
731Q, 732Q, 753N, 755I, 776S, 779R, 935Q, 948D, 975V, 976L, 978G, 1,009D, 1,026F
CDD
cd00653 (RNA_pol_B_RPB2)

776S

RPB10 interaction site
731Q, 732Q, 753N, 755I, 776S, 779R, 935Q, 948D, 975V, 976L, 978G, 1,009D, 1,026F
CDD
cd00653 (RNA_pol_B_RPB2)

779R

RPB10 interaction site
731Q, 732Q, 753N, 755I, 776S, 779R, 935Q, 948D, 975V, 976L, 978G, 1,009D, 1,026F
CDD
cd00653 (RNA_pol_B_RPB2)

935Q

RPB10 interaction site
731Q, 732Q, 753N, 755I, 776S, 779R, 935Q, 948D, 975V, 976L, 978G, 1,009D, 1,026F
CDD
cd00653 (RNA_pol_B_RPB2)

948D

RPB10 interaction site
731Q, 732Q, 753N, 755I, 776S, 779R, 935Q, 948D, 975V, 976L, 978G, 1,009D, 1,026F
CDD
cd00653 (RNA_pol_B_RPB2)

975V

RPB10 interaction site
731Q, 732Q, 753N, 755I, 776S, 779R, 935Q, 948D, 975V, 976L, 978G, 1,009D, 1,026F
CDD
cd00653 (RNA_pol_B_RPB2)

976L

RPB10 interaction site
731Q, 732Q, 753N, 755I, 776S, 779R, 935Q, 948D, 975V, 976L, 978G, 1,009D, 1,026F
CDD
cd00653 (RNA_pol_B_RPB2)

978G

RPB10 interaction site
731Q, 732Q, 753N, 755I, 776S, 779R, 935Q, 948D, 975V, 976L, 978G, 1,009D, 1,026F
CDD
cd00653 (RNA_pol_B_RPB2)

1,009D

RPB10 interaction site
731Q, 732Q, 753N, 755I, 776S, 779R, 935Q, 948D, 975V, 976L, 978G, 1,009D, 1,026F
CDD
cd00653 (RNA_pol_B_RPB2)

1,026F

RPB10 interaction site
731Q, 732Q, 753N, 755I, 776S, 779R, 935Q, 948D, 975V, 976L, 978G, 1,009D, 1,026F
CDD
cd00653 (RNA_pol_B_RPB2)
RPB11 interaction ...

764Y

RPB11 interaction site
764Y, 778D, 934P, 1,015I
CDD
cd00653 (RNA_pol_B_RPB2)

778D

RPB11 interaction site
764Y, 778D, 934P, 1,015I
CDD
cd00653 (RNA_pol_B_RPB2)

934P

RPB11 interaction site
764Y, 778D, 934P, 1,015I
CDD
cd00653 (RNA_pol_B_RPB2)

1,015I

RPB11 interaction site
764Y, 778D, 934P, 1,015I
CDD
cd00653 (RNA_pol_B_RPB2)
RPB3 interaction s...

778D

RPB3 interaction site
778D, 779R, 783R, 908R, 910T, 935Q, 936E, 937D, 940F, 942D, 943S, 1,014G, 1,015I, 1,016T, 1,017G, 1,018E, 1,019P, 1,020L, 1,021S, 1,023Y
CDD
cd00653 (RNA_pol_B_RPB2)

779R

RPB3 interaction site
778D, 779R, 783R, 908R, 910T, 935Q, 936E, 937D, 940F, 942D, 943S, 1,014G, 1,015I, 1,016T, 1,017G, 1,018E, 1,019P, 1,020L, 1,021S, 1,023Y
CDD
cd00653 (RNA_pol_B_RPB2)

783R

RPB3 interaction site
778D, 779R, 783R, 908R, 910T, 935Q, 936E, 937D, 940F, 942D, 943S, 1,014G, 1,015I, 1,016T, 1,017G, 1,018E, 1,019P, 1,020L, 1,021S, 1,023Y
CDD
cd00653 (RNA_pol_B_RPB2)

908R

RPB3 interaction site
778D, 779R, 783R, 908R, 910T, 935Q, 936E, 937D, 940F, 942D, 943S, 1,014G, 1,015I, 1,016T, 1,017G, 1,018E, 1,019P, 1,020L, 1,021S, 1,023Y
CDD
cd00653 (RNA_pol_B_RPB2)

910T

RPB3 interaction site
778D, 779R, 783R, 908R, 910T, 935Q, 936E, 937D, 940F, 942D, 943S, 1,014G, 1,015I, 1,016T, 1,017G, 1,018E, 1,019P, 1,020L, 1,021S, 1,023Y
CDD
cd00653 (RNA_pol_B_RPB2)

935Q

RPB3 interaction site
778D, 779R, 783R, 908R, 910T, 935Q, 936E, 937D, 940F, 942D, 943S, 1,014G, 1,015I, 1,016T, 1,017G, 1,018E, 1,019P, 1,020L, 1,021S, 1,023Y
CDD
cd00653 (RNA_pol_B_RPB2)

936E

RPB3 interaction site
778D, 779R, 783R, 908R, 910T, 935Q, 936E, 937D, 940F, 942D, 943S, 1,014G, 1,015I, 1,016T, 1,017G, 1,018E, 1,019P, 1,020L, 1,021S, 1,023Y
CDD
cd00653 (RNA_pol_B_RPB2)

937D

RPB3 interaction site
778D, 779R, 783R, 908R, 910T, 935Q, 936E, 937D, 940F, 942D, 943S, 1,014G, 1,015I, 1,016T, 1,017G, 1,018E, 1,019P, 1,020L, 1,021S, 1,023Y
CDD
cd00653 (RNA_pol_B_RPB2)

940F

RPB3 interaction site
778D, 779R, 783R, 908R, 910T, 935Q, 936E, 937D, 940F, 942D, 943S, 1,014G, 1,015I, 1,016T, 1,017G, 1,018E, 1,019P, 1,020L, 1,021S, 1,023Y
CDD
cd00653 (RNA_pol_B_RPB2)

942D

RPB3 interaction site
778D, 779R, 783R, 908R, 910T, 935Q, 936E, 937D, 940F, 942D, 943S, 1,014G, 1,015I, 1,016T, 1,017G, 1,018E, 1,019P, 1,020L, 1,021S, 1,023Y
CDD
cd00653 (RNA_pol_B_RPB2)

943S

RPB3 interaction site
778D, 779R, 783R, 908R, 910T, 935Q, 936E, 937D, 940F, 942D, 943S, 1,014G, 1,015I, 1,016T, 1,017G, 1,018E, 1,019P, 1,020L, 1,021S, 1,023Y
CDD
cd00653 (RNA_pol_B_RPB2)

1,014G

RPB3 interaction site
778D, 779R, 783R, 908R, 910T, 935Q, 936E, 937D, 940F, 942D, 943S, 1,014G, 1,015I, 1,016T, 1,017G, 1,018E, 1,019P, 1,020L, 1,021S, 1,023Y
CDD
cd00653 (RNA_pol_B_RPB2)

1,015I

RPB3 interaction site
778D, 779R, 783R, 908R, 910T, 935Q, 936E, 937D, 940F, 942D, 943S, 1,014G, 1,015I, 1,016T, 1,017G, 1,018E, 1,019P, 1,020L, 1,021S, 1,023Y
CDD
cd00653 (RNA_pol_B_RPB2)

1,016T

RPB3 interaction site
778D, 779R, 783R, 908R, 910T, 935Q, 936E, 937D, 940F, 942D, 943S, 1,014G, 1,015I, 1,016T, 1,017G, 1,018E, 1,019P, 1,020L, 1,021S, 1,023Y
CDD
cd00653 (RNA_pol_B_RPB2)

1,017G

RPB3 interaction site
778D, 779R, 783R, 908R, 910T, 935Q, 936E, 937D, 940F, 942D, 943S, 1,014G, 1,015I, 1,016T, 1,017G, 1,018E, 1,019P, 1,020L, 1,021S, 1,023Y
CDD
cd00653 (RNA_pol_B_RPB2)

1,018E

RPB3 interaction site
778D, 779R, 783R, 908R, 910T, 935Q, 936E, 937D, 940F, 942D, 943S, 1,014G, 1,015I, 1,016T, 1,017G, 1,018E, 1,019P, 1,020L, 1,021S, 1,023Y
CDD
cd00653 (RNA_pol_B_RPB2)

1,019P

RPB3 interaction site
778D, 779R, 783R, 908R, 910T, 935Q, 936E, 937D, 940F, 942D, 943S, 1,014G, 1,015I, 1,016T, 1,017G, 1,018E, 1,019P, 1,020L, 1,021S, 1,023Y
CDD
cd00653 (RNA_pol_B_RPB2)

1,020L

RPB3 interaction site
778D, 779R, 783R, 908R, 910T, 935Q, 936E, 937D, 940F, 942D, 943S, 1,014G, 1,015I, 1,016T, 1,017G, 1,018E, 1,019P, 1,020L, 1,021S, 1,023Y
CDD
cd00653 (RNA_pol_B_RPB2)

1,021S

RPB3 interaction site
778D, 779R, 783R, 908R, 910T, 935Q, 936E, 937D, 940F, 942D, 943S, 1,014G, 1,015I, 1,016T, 1,017G, 1,018E, 1,019P, 1,020L, 1,021S, 1,023Y
CDD
cd00653 (RNA_pol_B_RPB2)

1,023Y

RPB3 interaction site
778D, 779R, 783R, 908R, 910T, 935Q, 936E, 937D, 940F, 942D, 943S, 1,014G, 1,015I, 1,016T, 1,017G, 1,018E, 1,019P, 1,020L, 1,021S, 1,023Y
CDD
cd00653 (RNA_pol_B_RPB2)

GO term prediction

Biological Process

GO:0006351 transcription, DNA-templated

Molecular Function

GO:0003677 DNA binding
GO:0003899 DNA-directed 5'-3' RNA polymerase activity
GO:0032549 ribonucleoside binding

Cellular Component

None predicted.