Protein

GBC53475.1

Length
1,000 amino acids

Protein family membership

None predicted.

Domains and repeats

  1. Domain
1 100 200 300 400 500 600 700 800 900 1000 1000

Detailed signature matches

  1. Domain IPR005162
    Retrotransposon gag domain
    1. PF03732 (Retrotrans...)
  2. Domain IPR001878
    Zinc finger, CCHC-type
    1. PS50158 (ZF_CCHC)
    2. PF00098 (zf-CCHC)
    3. SM00343 (c2hcfinal6)
    4. SSF57756 (Retroviru...)
  3. Domain IPR021109
    Aspartic peptidase domain
    1. SSF50630 (Acid prot...)
  4. Domain IPR013242
    Retroviral aspartyl protease
    1. PF08284 (RVP_2)
  5. Domain IPR000477
    Reverse transcriptase domain
    1. PF00078 (RVT_1)
    2. PS50878 (RT_POL)
Unintegrated signatures no IPR
Unintegrated signatures
  1. Coil
  2. SSF56672 (DNA/RNA p...)
  3. cd00303 (retropepsi...)
  4. cd01647 (RT_LTR)
  5. mobidb-lite (disord...)

Residue annotation

  1. Catalytic residue ...
  2. catalytic motif cd...
  3. inhibitor binding ...
  4. Active site flap c...
  5. putative NTP bindi...
  6. putative active si...
  7. putative nucleic a...

GO term prediction

Biological Process

None predicted.

Molecular Function

GO:0003676 nucleic acid binding
GO:0008270 zinc ion binding

Cellular Component

None predicted.