GBC42427.1

Protein

Length

1,273 amino acids

Protein family membership

None predicted.

Domains and repeats

Domain
5 - 55
P-loop containing nucleoside triphosphate hydrolase (IPR027417)
606 - 706
RAD50, zinc hook (IPR013134)
1,064 - 1,234
P-loop containing nucleoside triphosphate hydrolase (IPR027417)

1 200 400 600 800 1000 1273

Detailed signature matches

IPR027417

P-loop containing nucleoside triphosphate hydrolase
1. SSF52540 (P-loop co...)
  
  5 - 55
  
  SUPERFAMILY
  SSF52540 (P-loop containing nucleoside triphosphate hydrolases)
  
  1,064 - 1,234
  
  SUPERFAMILY
  SSF52540 (P-loop containing nucleoside triphosphate hydrolases)
IPR013134

RAD50, zinc hook
1. PS51131 (ZN_HOOK)
  
  606 - 706
  
  PROSITE profiles
  PS51131 (ZN_HOOK)
2. PF04423 (Rad50_zn_hook)
  
  636 - 683
  
  Pfam
  PF04423 (Rad50_zn_hook)

no IPR

Unintegrated signatures

Coil

989 - 1,035

COILS
Coil (Coil)

609 - 629

COILS
Coil (Coil)

877 - 904

COILS
Coil (Coil)

790 - 827

COILS
Coil (Coil)

284 - 339

COILS
Coil (Coil)

474 - 501

COILS
Coil (Coil)

451 - 471

COILS
Coil (Coil)

373 - 411

COILS
Coil (Coil)

759 - 779

COILS
Coil (Coil)

711 - 745

COILS
Coil (Coil)

842 - 869

COILS
Coil (Coil)

547 - 595

COILS
Coil (Coil)

187 - 276

COILS
Coil (Coil)
PF13476 (AAA_23)

6 - 239

Pfam
PF13476 (AAA_23)
cd03240 (ABC_Rad50)

1,154 - 1,258

CDD
cd03240 (ABC_Rad50)

4 - 173

CDD
cd03240 (ABC_Rad50)

Residue annotation

Walker A/P-loop cd...

34G

Walker A/P-loop
34G, 35T, 36N, 37G, 38S, 39G, 40K, 41T
CDD
cd03240 (ABC_Rad50)

35T

Walker A/P-loop
34G, 35T, 36N, 37G, 38S, 39G, 40K, 41T
CDD
cd03240 (ABC_Rad50)

36N

Walker A/P-loop
34G, 35T, 36N, 37G, 38S, 39G, 40K, 41T
CDD
cd03240 (ABC_Rad50)

37G

Walker A/P-loop
34G, 35T, 36N, 37G, 38S, 39G, 40K, 41T
CDD
cd03240 (ABC_Rad50)

38S

Walker A/P-loop
34G, 35T, 36N, 37G, 38S, 39G, 40K, 41T
CDD
cd03240 (ABC_Rad50)

39G

Walker A/P-loop
34G, 35T, 36N, 37G, 38S, 39G, 40K, 41T
CDD
cd03240 (ABC_Rad50)

40K

Walker A/P-loop
34G, 35T, 36N, 37G, 38S, 39G, 40K, 41T
CDD
cd03240 (ABC_Rad50)

41T

Walker A/P-loop
34G, 35T, 36N, 37G, 38S, 39G, 40K, 41T
CDD
cd03240 (ABC_Rad50)
ATP binding site c...

37G

ATP binding site
37G, 38S, 40K, 41T, 42T, 159H
CDD
cd03240 (ABC_Rad50)

38S

ATP binding site
37G, 38S, 40K, 41T, 42T, 159H
CDD
cd03240 (ABC_Rad50)

40K

ATP binding site
37G, 38S, 40K, 41T, 42T, 159H
CDD
cd03240 (ABC_Rad50)

41T

ATP binding site
37G, 38S, 40K, 41T, 42T, 159H
CDD
cd03240 (ABC_Rad50)

42T

ATP binding site
37G, 38S, 40K, 41T, 42T, 159H
CDD
cd03240 (ABC_Rad50)

159H

ATP binding site
37G, 38S, 40K, 41T, 42T, 159H
CDD
cd03240 (ABC_Rad50)
Q-loop/lid cd03240

156I

Q-loop/lid
156I, 157F, 158C, 159H
CDD
cd03240 (ABC_Rad50)

157F

Q-loop/lid
156I, 157F, 158C, 159H
CDD
cd03240 (ABC_Rad50)

158C

Q-loop/lid
156I, 157F, 158C, 159H
CDD
cd03240 (ABC_Rad50)

159H

Q-loop/lid
156I, 157F, 158C, 159H
CDD
cd03240 (ABC_Rad50)
ABC transporter si...

1,161C

ABC transporter signature motif
1,161C, 1,162S, 1,163A, 1,164G, 1,165Q, 1,166R, 1,167M, 1,168L, 1,169A, 1,170S
CDD
cd03240 (ABC_Rad50)

1,162S

ABC transporter signature motif
1,161C, 1,162S, 1,163A, 1,164G, 1,165Q, 1,166R, 1,167M, 1,168L, 1,169A, 1,170S
CDD
cd03240 (ABC_Rad50)

1,163A

ABC transporter signature motif
1,161C, 1,162S, 1,163A, 1,164G, 1,165Q, 1,166R, 1,167M, 1,168L, 1,169A, 1,170S
CDD
cd03240 (ABC_Rad50)

1,164G

ABC transporter signature motif
1,161C, 1,162S, 1,163A, 1,164G, 1,165Q, 1,166R, 1,167M, 1,168L, 1,169A, 1,170S
CDD
cd03240 (ABC_Rad50)

1,165Q

ABC transporter signature motif
1,161C, 1,162S, 1,163A, 1,164G, 1,165Q, 1,166R, 1,167M, 1,168L, 1,169A, 1,170S
CDD
cd03240 (ABC_Rad50)

1,166R

ABC transporter signature motif
1,161C, 1,162S, 1,163A, 1,164G, 1,165Q, 1,166R, 1,167M, 1,168L, 1,169A, 1,170S
CDD
cd03240 (ABC_Rad50)

1,167M

ABC transporter signature motif
1,161C, 1,162S, 1,163A, 1,164G, 1,165Q, 1,166R, 1,167M, 1,168L, 1,169A, 1,170S
CDD
cd03240 (ABC_Rad50)

1,168L

ABC transporter signature motif
1,161C, 1,162S, 1,163A, 1,164G, 1,165Q, 1,166R, 1,167M, 1,168L, 1,169A, 1,170S
CDD
cd03240 (ABC_Rad50)

1,169A

ABC transporter signature motif
1,161C, 1,162S, 1,163A, 1,164G, 1,165Q, 1,166R, 1,167M, 1,168L, 1,169A, 1,170S
CDD
cd03240 (ABC_Rad50)

1,170S

ABC transporter signature motif
1,161C, 1,162S, 1,163A, 1,164G, 1,165Q, 1,166R, 1,167M, 1,168L, 1,169A, 1,170S
CDD
cd03240 (ABC_Rad50)
Walker B cd03240

1,187M

Walker B
1,187M, 1,188F, 1,189V, 1,190L, 1,191D, 1,192E
CDD
cd03240 (ABC_Rad50)

1,188F

Walker B
1,187M, 1,188F, 1,189V, 1,190L, 1,191D, 1,192E
CDD
cd03240 (ABC_Rad50)

1,189V

Walker B
1,187M, 1,188F, 1,189V, 1,190L, 1,191D, 1,192E
CDD
cd03240 (ABC_Rad50)

1,190L

Walker B
1,187M, 1,188F, 1,189V, 1,190L, 1,191D, 1,192E
CDD
cd03240 (ABC_Rad50)

1,191D

Walker B
1,187M, 1,188F, 1,189V, 1,190L, 1,191D, 1,192E
CDD
cd03240 (ABC_Rad50)

1,192E

Walker B
1,187M, 1,188F, 1,189V, 1,190L, 1,191D, 1,192E
CDD
cd03240 (ABC_Rad50)
ATP binding site c...

1,191D

ATP binding site
1,191D, 1,192E, 1,229H
CDD
cd03240 (ABC_Rad50)

1,192E

ATP binding site
1,191D, 1,192E, 1,229H
CDD
cd03240 (ABC_Rad50)

1,229H

ATP binding site
1,191D, 1,192E, 1,229H
CDD
cd03240 (ABC_Rad50)
D-loop cd03240

1,195T

D-loop
1,195T, 1,196N, 1,197L, 1,198D
CDD
cd03240 (ABC_Rad50)

1,196N

D-loop
1,195T, 1,196N, 1,197L, 1,198D
CDD
cd03240 (ABC_Rad50)

1,197L

D-loop
1,195T, 1,196N, 1,197L, 1,198D
CDD
cd03240 (ABC_Rad50)

1,198D

D-loop
1,195T, 1,196N, 1,197L, 1,198D
CDD
cd03240 (ABC_Rad50)
H-loop/switch regi...

1,225V

H-loop/switch region
1,225V, 1,226I, 1,227I, 1,228T, 1,229H, 1,230D, 1,231D
CDD
cd03240 (ABC_Rad50)

1,226I

H-loop/switch region
1,225V, 1,226I, 1,227I, 1,228T, 1,229H, 1,230D, 1,231D
CDD
cd03240 (ABC_Rad50)

1,227I

H-loop/switch region
1,225V, 1,226I, 1,227I, 1,228T, 1,229H, 1,230D, 1,231D
CDD
cd03240 (ABC_Rad50)

1,228T

H-loop/switch region
1,225V, 1,226I, 1,227I, 1,228T, 1,229H, 1,230D, 1,231D
CDD
cd03240 (ABC_Rad50)

1,229H

H-loop/switch region
1,225V, 1,226I, 1,227I, 1,228T, 1,229H, 1,230D, 1,231D
CDD
cd03240 (ABC_Rad50)

1,230D

H-loop/switch region
1,225V, 1,226I, 1,227I, 1,228T, 1,229H, 1,230D, 1,231D
CDD
cd03240 (ABC_Rad50)

1,231D

H-loop/switch region
1,225V, 1,226I, 1,227I, 1,228T, 1,229H, 1,230D, 1,231D
CDD
cd03240 (ABC_Rad50)

GO term prediction

Biological Process

None predicted.

Molecular Function

None predicted.

Cellular Component

None predicted.

Filter view on

Entry type

Status

Per-residue features

GBC42427.1

Protein family membership

Domains and repeats

Detailed signature matches

Residue annotation

GO term prediction

Biological Process

Molecular Function

Cellular Component