GBC41721.1

Protein

Length

1,377 amino acids

Protein family membership

Structural maintenance of chromosomes protein (IPR024704)

Domains and repeats

Domain
47 - 275
P-loop containing nucleoside triphosphate hydrolase (IPR027417)
538 - 751
SMCs flexible hinge (IPR010935)
1,142 - 1,228
P-loop containing nucleoside triphosphate hydrolase (IPR027417)
Domain
49 - 1,236
RecF/RecN/SMC, N-terminal (IPR003395)
1,305 - 1,365
Zinc finger C2H2-type (IPR013087)
Zinc finger, double-stranded RNA binding (IPR022755)
Matrin/U1-C-like, C2H2-type zinc finger (IPR003604)

1 200 400 600 800 1000 1200 1377

Detailed signature matches

IPR024704

Structural maintenance of chromosomes protein
1. PIRSF005719 (SMC)
  
  46 - 1,250
  
  PIRSF
  PIRSF005719 (SMC)
IPR027417

P-loop containing nucleoside triphosphate hydrolase
1. SSF52540 (P-loop co...)
  
  47 - 275
  
  SUPERFAMILY
  SSF52540 (P-loop containing nucleoside triphosphate hydrolases)
  
  1,142 - 1,228
  
  SUPERFAMILY
  SSF52540 (P-loop containing nucleoside triphosphate hydrolases)
IPR003395

RecF/RecN/SMC, N-terminal
1. PF02463 (SMC_N)
  
  49 - 1,236
  
  Pfam
  PF02463 (SMC_N)
IPR010935

SMCs flexible hinge
1. PF06470 (SMC_hinge)
  
  579 - 692
  
  Pfam
  PF06470 (SMC_hinge)
2. SM00968 (SMC_hinge_2)
  
  579 - 692
  
  SMART
  SM00968 (SMC_hinge_2)
3. SSF75553 (Smc hinge...)
  
  538 - 751
  
  SUPERFAMILY
  SSF75553 (Smc hinge domain)
IPR013087

Zinc finger C2H2-type
1. SSF57667 (beta-beta...)
  
  1,305 - 1,365
  
  SUPERFAMILY
  SSF57667 (beta-beta-alpha zinc fingers)
2. PS50157 (ZINC_FINGE...)
  
  1,317 - 1,346
  
  PROSITE profiles
  PS50157 (ZINC_FINGER_C2H2_2)
3. PS00028 (ZINC_FINGE...)
  
  1,319 - 1,341
  
  PROSITE patterns
  PS00028 (ZINC_FINGER_C2H2_1)
IPR003604

Matrin/U1-C-like, C2H2-type zinc finger
1. SM00451 (ZnF_U1_5)
  
  1,314 - 1,348
  
  SMART
  SM00451 (ZnF_U1_5)
IPR022755

Zinc finger, double-stranded RNA binding
1. PF12171 (zf-C2H2_jaz)
  
  1,316 - 1,342
  
  Pfam
  PF12171 (zf-C2H2_jaz)

no IPR

Unintegrated signatures

Coil

862 - 882

COILS
Coil (Coil)

412 - 432

COILS
Coil (Coil)

458 - 506

COILS
Coil (Coil)

739 - 787

COILS
Coil (Coil)

812 - 853

COILS
Coil (Coil)

233 - 281

COILS
Coil (Coil)

300 - 362

COILS
Coil (Coil)

1,056 - 1,093

COILS
Coil (Coil)

528 - 562

COILS
Coil (Coil)

890 - 966

COILS
Coil (Coil)
SSF57997 (Tropomyosin)

437 - 558

SUPERFAMILY
SSF57997 (Tropomyosin)
cd03274 (ABC_SMC4_euk)

47 - 208

CDD
cd03274 (ABC_SMC4_euk)

1,142 - 1,238

CDD
cd03274 (ABC_SMC4_euk)
mobidb-lite (disord...)

20 - 41

MobiDB Lite
mobidb-lite (disorder_prediction)

Residue annotation

Walker A/P-loop cd...

78G

Walker A/P-loop
78G, 79P, 80N, 81G, 82S, 83G, 84K, 85S
CDD
cd03274 (ABC_SMC4_euk)

79P

Walker A/P-loop
78G, 79P, 80N, 81G, 82S, 83G, 84K, 85S
CDD
cd03274 (ABC_SMC4_euk)

80N

Walker A/P-loop
78G, 79P, 80N, 81G, 82S, 83G, 84K, 85S
CDD
cd03274 (ABC_SMC4_euk)

81G

Walker A/P-loop
78G, 79P, 80N, 81G, 82S, 83G, 84K, 85S
CDD
cd03274 (ABC_SMC4_euk)

82S

Walker A/P-loop
78G, 79P, 80N, 81G, 82S, 83G, 84K, 85S
CDD
cd03274 (ABC_SMC4_euk)

83G

Walker A/P-loop
78G, 79P, 80N, 81G, 82S, 83G, 84K, 85S
CDD
cd03274 (ABC_SMC4_euk)

84K

Walker A/P-loop
78G, 79P, 80N, 81G, 82S, 83G, 84K, 85S
CDD
cd03274 (ABC_SMC4_euk)

85S

Walker A/P-loop
78G, 79P, 80N, 81G, 82S, 83G, 84K, 85S
CDD
cd03274 (ABC_SMC4_euk)
ATP binding site c...

81G

ATP binding site
81G, 82S, 84K, 85S, 86N, 195Q
CDD
cd03274 (ABC_SMC4_euk)

82S

ATP binding site
81G, 82S, 84K, 85S, 86N, 195Q
CDD
cd03274 (ABC_SMC4_euk)

84K

ATP binding site
81G, 82S, 84K, 85S, 86N, 195Q
CDD
cd03274 (ABC_SMC4_euk)

85S

ATP binding site
81G, 82S, 84K, 85S, 86N, 195Q
CDD
cd03274 (ABC_SMC4_euk)

86N

ATP binding site
81G, 82S, 84K, 85S, 86N, 195Q
CDD
cd03274 (ABC_SMC4_euk)

195Q

ATP binding site
81G, 82S, 84K, 85S, 86N, 195Q
CDD
cd03274 (ABC_SMC4_euk)
Q-loop/lid cd03274

192L

Q-loop/lid
192L, 193I, 194L, 195Q
CDD
cd03274 (ABC_SMC4_euk)

193I

Q-loop/lid
192L, 193I, 194L, 195Q
CDD
cd03274 (ABC_SMC4_euk)

194L

Q-loop/lid
192L, 193I, 194L, 195Q
CDD
cd03274 (ABC_SMC4_euk)

195Q

Q-loop/lid
192L, 193I, 194L, 195Q
CDD
cd03274 (ABC_SMC4_euk)
ABC transporter si...

1,154L

ABC transporter signature motif
1,154L, 1,155S, 1,156G, 1,157G, 1,158E, 1,159K, 1,160T, 1,161L, 1,162S, 1,163S
CDD
cd03274 (ABC_SMC4_euk)

1,155S

ABC transporter signature motif
1,154L, 1,155S, 1,156G, 1,157G, 1,158E, 1,159K, 1,160T, 1,161L, 1,162S, 1,163S
CDD
cd03274 (ABC_SMC4_euk)

1,156G

ABC transporter signature motif
1,154L, 1,155S, 1,156G, 1,157G, 1,158E, 1,159K, 1,160T, 1,161L, 1,162S, 1,163S
CDD
cd03274 (ABC_SMC4_euk)

1,157G

ABC transporter signature motif
1,154L, 1,155S, 1,156G, 1,157G, 1,158E, 1,159K, 1,160T, 1,161L, 1,162S, 1,163S
CDD
cd03274 (ABC_SMC4_euk)

1,158E

ABC transporter signature motif
1,154L, 1,155S, 1,156G, 1,157G, 1,158E, 1,159K, 1,160T, 1,161L, 1,162S, 1,163S
CDD
cd03274 (ABC_SMC4_euk)

1,159K

ABC transporter signature motif
1,154L, 1,155S, 1,156G, 1,157G, 1,158E, 1,159K, 1,160T, 1,161L, 1,162S, 1,163S
CDD
cd03274 (ABC_SMC4_euk)

1,160T

ABC transporter signature motif
1,154L, 1,155S, 1,156G, 1,157G, 1,158E, 1,159K, 1,160T, 1,161L, 1,162S, 1,163S
CDD
cd03274 (ABC_SMC4_euk)

1,161L

ABC transporter signature motif
1,154L, 1,155S, 1,156G, 1,157G, 1,158E, 1,159K, 1,160T, 1,161L, 1,162S, 1,163S
CDD
cd03274 (ABC_SMC4_euk)

1,162S

ABC transporter signature motif
1,154L, 1,155S, 1,156G, 1,157G, 1,158E, 1,159K, 1,160T, 1,161L, 1,162S, 1,163S
CDD
cd03274 (ABC_SMC4_euk)

1,163S

ABC transporter signature motif
1,154L, 1,155S, 1,156G, 1,157G, 1,158E, 1,159K, 1,160T, 1,161L, 1,162S, 1,163S
CDD
cd03274 (ABC_SMC4_euk)
Walker B cd03274

1,178L

Walker B
1,178L, 1,179Y, 1,180V, 1,181M, 1,182D, 1,183E
CDD
cd03274 (ABC_SMC4_euk)

1,179Y

Walker B
1,178L, 1,179Y, 1,180V, 1,181M, 1,182D, 1,183E
CDD
cd03274 (ABC_SMC4_euk)

1,180V

Walker B
1,178L, 1,179Y, 1,180V, 1,181M, 1,182D, 1,183E
CDD
cd03274 (ABC_SMC4_euk)

1,181M

Walker B
1,178L, 1,179Y, 1,180V, 1,181M, 1,182D, 1,183E
CDD
cd03274 (ABC_SMC4_euk)

1,182D

Walker B
1,178L, 1,179Y, 1,180V, 1,181M, 1,182D, 1,183E
CDD
cd03274 (ABC_SMC4_euk)

1,183E

Walker B
1,178L, 1,179Y, 1,180V, 1,181M, 1,182D, 1,183E
CDD
cd03274 (ABC_SMC4_euk)
ATP binding site c...

1,182D

ATP binding site
1,182D, 1,183E, 1,214L
CDD
cd03274 (ABC_SMC4_euk)

1,183E

ATP binding site
1,182D, 1,183E, 1,214L
CDD
cd03274 (ABC_SMC4_euk)

1,214L

ATP binding site
1,182D, 1,183E, 1,214L
CDD
cd03274 (ABC_SMC4_euk)
D-loop cd03274

1,186A

D-loop
1,186A, 1,187A, 1,188L, 1,189D
CDD
cd03274 (ABC_SMC4_euk)

1,187A

D-loop
1,186A, 1,187A, 1,188L, 1,189D
CDD
cd03274 (ABC_SMC4_euk)

1,188L

D-loop
1,186A, 1,187A, 1,188L, 1,189D
CDD
cd03274 (ABC_SMC4_euk)

1,189D

D-loop
1,186A, 1,187A, 1,188L, 1,189D
CDD
cd03274 (ABC_SMC4_euk)
H-loop/switch regi...

1,210V

H-loop/switch region
1,210V, 1,211V, 1,212I, 1,213S, 1,214L, 1,215R, 1,216N
CDD
cd03274 (ABC_SMC4_euk)

1,211V

H-loop/switch region
1,210V, 1,211V, 1,212I, 1,213S, 1,214L, 1,215R, 1,216N
CDD
cd03274 (ABC_SMC4_euk)

1,212I

H-loop/switch region
1,210V, 1,211V, 1,212I, 1,213S, 1,214L, 1,215R, 1,216N
CDD
cd03274 (ABC_SMC4_euk)

1,213S

H-loop/switch region
1,210V, 1,211V, 1,212I, 1,213S, 1,214L, 1,215R, 1,216N
CDD
cd03274 (ABC_SMC4_euk)

1,214L

H-loop/switch region
1,210V, 1,211V, 1,212I, 1,213S, 1,214L, 1,215R, 1,216N
CDD
cd03274 (ABC_SMC4_euk)

1,215R

H-loop/switch region
1,210V, 1,211V, 1,212I, 1,213S, 1,214L, 1,215R, 1,216N
CDD
cd03274 (ABC_SMC4_euk)

1,216N

H-loop/switch region
1,210V, 1,211V, 1,212I, 1,213S, 1,214L, 1,215R, 1,216N
CDD
cd03274 (ABC_SMC4_euk)

GO term prediction

Biological Process

GO:0051276 chromosome organization

Molecular Function

GO:0003676 nucleic acid binding
GO:0005515 protein binding
GO:0005524 ATP binding
GO:0008270 zinc ion binding

Cellular Component

GO:0005694 chromosome

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Entry type

Status

Per-residue features