GBC26685.1

Protein

Length

292 amino acids

Protein family membership

None predicted.

Domains and repeats

Domain
21 - 189
Ribosomal protein S5 domain 2-type fold (IPR020568)
Exoribonuclease, phosphorolytic domain 1 (IPR001247)
218 - 232
Ribosomal protein S5 domain 2-type fold (IPR020568)
Domain
210 - 284
Exoribonuclease, phosphorolytic domain 2 (IPR015847)

1 50 100 150 200 250 292

Detailed signature matches

IPR020568

Ribosomal protein S5 domain 2-type fold
1. SSF54211 (Ribosomal...)
  
  218 - 232
  
  SUPERFAMILY
  SSF54211 (Ribosomal protein S5 domain 2-like)
  
  21 - 189
  
  SUPERFAMILY
  SSF54211 (Ribosomal protein S5 domain 2-like)
IPR001247

Exoribonuclease, phosphorolytic domain 1
1. PF01138 (RNase_PH)
  
  50 - 184
  
  Pfam
  PF01138 (RNase_PH)
IPR015847

Exoribonuclease, phosphorolytic domain 2
1. PF03725 (RNase_PH_C)
  
  212 - 272
  
  Pfam
  PF03725 (RNase_PH_C)
2. SSF55666 (Ribonucle...)
  
  210 - 284
  
  SUPERFAMILY
  SSF55666 (Ribonuclease PH domain 2-like)

no IPR

Unintegrated signatures

cd11369 (RNase_PH_R...)

24 - 281

CDD
cd11369 (RNase_PH_RRP43)

Residue annotation

hexamer interface ...

62T

hexamer interface
62T, 64D, 79G, 81K, 82A, 83E, 98V, 100N, 105P, 122V, 125E, 129K, 151W, 156D, 161N, 179M, 180N, 181V, 208I, 248L, 249C, 250N, 251I, 252W, 253K, 254T, 255G, 256S, 257S, 258C, 263L, 267I
CDD
cd11369 (RNase_PH_RRP43)

64D

hexamer interface
62T, 64D, 79G, 81K, 82A, 83E, 98V, 100N, 105P, 122V, 125E, 129K, 151W, 156D, 161N, 179M, 180N, 181V, 208I, 248L, 249C, 250N, 251I, 252W, 253K, 254T, 255G, 256S, 257S, 258C, 263L, 267I
CDD
cd11369 (RNase_PH_RRP43)

79G

hexamer interface
62T, 64D, 79G, 81K, 82A, 83E, 98V, 100N, 105P, 122V, 125E, 129K, 151W, 156D, 161N, 179M, 180N, 181V, 208I, 248L, 249C, 250N, 251I, 252W, 253K, 254T, 255G, 256S, 257S, 258C, 263L, 267I
CDD
cd11369 (RNase_PH_RRP43)

81K

hexamer interface
62T, 64D, 79G, 81K, 82A, 83E, 98V, 100N, 105P, 122V, 125E, 129K, 151W, 156D, 161N, 179M, 180N, 181V, 208I, 248L, 249C, 250N, 251I, 252W, 253K, 254T, 255G, 256S, 257S, 258C, 263L, 267I
CDD
cd11369 (RNase_PH_RRP43)

82A

hexamer interface
62T, 64D, 79G, 81K, 82A, 83E, 98V, 100N, 105P, 122V, 125E, 129K, 151W, 156D, 161N, 179M, 180N, 181V, 208I, 248L, 249C, 250N, 251I, 252W, 253K, 254T, 255G, 256S, 257S, 258C, 263L, 267I
CDD
cd11369 (RNase_PH_RRP43)

83E

hexamer interface
62T, 64D, 79G, 81K, 82A, 83E, 98V, 100N, 105P, 122V, 125E, 129K, 151W, 156D, 161N, 179M, 180N, 181V, 208I, 248L, 249C, 250N, 251I, 252W, 253K, 254T, 255G, 256S, 257S, 258C, 263L, 267I
CDD
cd11369 (RNase_PH_RRP43)

98V

hexamer interface
62T, 64D, 79G, 81K, 82A, 83E, 98V, 100N, 105P, 122V, 125E, 129K, 151W, 156D, 161N, 179M, 180N, 181V, 208I, 248L, 249C, 250N, 251I, 252W, 253K, 254T, 255G, 256S, 257S, 258C, 263L, 267I
CDD
cd11369 (RNase_PH_RRP43)

100N

hexamer interface
62T, 64D, 79G, 81K, 82A, 83E, 98V, 100N, 105P, 122V, 125E, 129K, 151W, 156D, 161N, 179M, 180N, 181V, 208I, 248L, 249C, 250N, 251I, 252W, 253K, 254T, 255G, 256S, 257S, 258C, 263L, 267I
CDD
cd11369 (RNase_PH_RRP43)

105P

hexamer interface
62T, 64D, 79G, 81K, 82A, 83E, 98V, 100N, 105P, 122V, 125E, 129K, 151W, 156D, 161N, 179M, 180N, 181V, 208I, 248L, 249C, 250N, 251I, 252W, 253K, 254T, 255G, 256S, 257S, 258C, 263L, 267I
CDD
cd11369 (RNase_PH_RRP43)

122V

hexamer interface
62T, 64D, 79G, 81K, 82A, 83E, 98V, 100N, 105P, 122V, 125E, 129K, 151W, 156D, 161N, 179M, 180N, 181V, 208I, 248L, 249C, 250N, 251I, 252W, 253K, 254T, 255G, 256S, 257S, 258C, 263L, 267I
CDD
cd11369 (RNase_PH_RRP43)

125E

hexamer interface
62T, 64D, 79G, 81K, 82A, 83E, 98V, 100N, 105P, 122V, 125E, 129K, 151W, 156D, 161N, 179M, 180N, 181V, 208I, 248L, 249C, 250N, 251I, 252W, 253K, 254T, 255G, 256S, 257S, 258C, 263L, 267I
CDD
cd11369 (RNase_PH_RRP43)

129K

hexamer interface
62T, 64D, 79G, 81K, 82A, 83E, 98V, 100N, 105P, 122V, 125E, 129K, 151W, 156D, 161N, 179M, 180N, 181V, 208I, 248L, 249C, 250N, 251I, 252W, 253K, 254T, 255G, 256S, 257S, 258C, 263L, 267I
CDD
cd11369 (RNase_PH_RRP43)

151W

hexamer interface
62T, 64D, 79G, 81K, 82A, 83E, 98V, 100N, 105P, 122V, 125E, 129K, 151W, 156D, 161N, 179M, 180N, 181V, 208I, 248L, 249C, 250N, 251I, 252W, 253K, 254T, 255G, 256S, 257S, 258C, 263L, 267I
CDD
cd11369 (RNase_PH_RRP43)

156D

hexamer interface
62T, 64D, 79G, 81K, 82A, 83E, 98V, 100N, 105P, 122V, 125E, 129K, 151W, 156D, 161N, 179M, 180N, 181V, 208I, 248L, 249C, 250N, 251I, 252W, 253K, 254T, 255G, 256S, 257S, 258C, 263L, 267I
CDD
cd11369 (RNase_PH_RRP43)

161N

hexamer interface
62T, 64D, 79G, 81K, 82A, 83E, 98V, 100N, 105P, 122V, 125E, 129K, 151W, 156D, 161N, 179M, 180N, 181V, 208I, 248L, 249C, 250N, 251I, 252W, 253K, 254T, 255G, 256S, 257S, 258C, 263L, 267I
CDD
cd11369 (RNase_PH_RRP43)

179M

hexamer interface
62T, 64D, 79G, 81K, 82A, 83E, 98V, 100N, 105P, 122V, 125E, 129K, 151W, 156D, 161N, 179M, 180N, 181V, 208I, 248L, 249C, 250N, 251I, 252W, 253K, 254T, 255G, 256S, 257S, 258C, 263L, 267I
CDD
cd11369 (RNase_PH_RRP43)

180N

hexamer interface
62T, 64D, 79G, 81K, 82A, 83E, 98V, 100N, 105P, 122V, 125E, 129K, 151W, 156D, 161N, 179M, 180N, 181V, 208I, 248L, 249C, 250N, 251I, 252W, 253K, 254T, 255G, 256S, 257S, 258C, 263L, 267I
CDD
cd11369 (RNase_PH_RRP43)

181V

hexamer interface
62T, 64D, 79G, 81K, 82A, 83E, 98V, 100N, 105P, 122V, 125E, 129K, 151W, 156D, 161N, 179M, 180N, 181V, 208I, 248L, 249C, 250N, 251I, 252W, 253K, 254T, 255G, 256S, 257S, 258C, 263L, 267I
CDD
cd11369 (RNase_PH_RRP43)

208I

hexamer interface
62T, 64D, 79G, 81K, 82A, 83E, 98V, 100N, 105P, 122V, 125E, 129K, 151W, 156D, 161N, 179M, 180N, 181V, 208I, 248L, 249C, 250N, 251I, 252W, 253K, 254T, 255G, 256S, 257S, 258C, 263L, 267I
CDD
cd11369 (RNase_PH_RRP43)

248L

hexamer interface
62T, 64D, 79G, 81K, 82A, 83E, 98V, 100N, 105P, 122V, 125E, 129K, 151W, 156D, 161N, 179M, 180N, 181V, 208I, 248L, 249C, 250N, 251I, 252W, 253K, 254T, 255G, 256S, 257S, 258C, 263L, 267I
CDD
cd11369 (RNase_PH_RRP43)

249C

hexamer interface
62T, 64D, 79G, 81K, 82A, 83E, 98V, 100N, 105P, 122V, 125E, 129K, 151W, 156D, 161N, 179M, 180N, 181V, 208I, 248L, 249C, 250N, 251I, 252W, 253K, 254T, 255G, 256S, 257S, 258C, 263L, 267I
CDD
cd11369 (RNase_PH_RRP43)

250N

hexamer interface
62T, 64D, 79G, 81K, 82A, 83E, 98V, 100N, 105P, 122V, 125E, 129K, 151W, 156D, 161N, 179M, 180N, 181V, 208I, 248L, 249C, 250N, 251I, 252W, 253K, 254T, 255G, 256S, 257S, 258C, 263L, 267I
CDD
cd11369 (RNase_PH_RRP43)

251I

hexamer interface
62T, 64D, 79G, 81K, 82A, 83E, 98V, 100N, 105P, 122V, 125E, 129K, 151W, 156D, 161N, 179M, 180N, 181V, 208I, 248L, 249C, 250N, 251I, 252W, 253K, 254T, 255G, 256S, 257S, 258C, 263L, 267I
CDD
cd11369 (RNase_PH_RRP43)

252W

hexamer interface
62T, 64D, 79G, 81K, 82A, 83E, 98V, 100N, 105P, 122V, 125E, 129K, 151W, 156D, 161N, 179M, 180N, 181V, 208I, 248L, 249C, 250N, 251I, 252W, 253K, 254T, 255G, 256S, 257S, 258C, 263L, 267I
CDD
cd11369 (RNase_PH_RRP43)

253K

hexamer interface
62T, 64D, 79G, 81K, 82A, 83E, 98V, 100N, 105P, 122V, 125E, 129K, 151W, 156D, 161N, 179M, 180N, 181V, 208I, 248L, 249C, 250N, 251I, 252W, 253K, 254T, 255G, 256S, 257S, 258C, 263L, 267I
CDD
cd11369 (RNase_PH_RRP43)

254T

hexamer interface
62T, 64D, 79G, 81K, 82A, 83E, 98V, 100N, 105P, 122V, 125E, 129K, 151W, 156D, 161N, 179M, 180N, 181V, 208I, 248L, 249C, 250N, 251I, 252W, 253K, 254T, 255G, 256S, 257S, 258C, 263L, 267I
CDD
cd11369 (RNase_PH_RRP43)

255G

hexamer interface
62T, 64D, 79G, 81K, 82A, 83E, 98V, 100N, 105P, 122V, 125E, 129K, 151W, 156D, 161N, 179M, 180N, 181V, 208I, 248L, 249C, 250N, 251I, 252W, 253K, 254T, 255G, 256S, 257S, 258C, 263L, 267I
CDD
cd11369 (RNase_PH_RRP43)

256S

hexamer interface
62T, 64D, 79G, 81K, 82A, 83E, 98V, 100N, 105P, 122V, 125E, 129K, 151W, 156D, 161N, 179M, 180N, 181V, 208I, 248L, 249C, 250N, 251I, 252W, 253K, 254T, 255G, 256S, 257S, 258C, 263L, 267I
CDD
cd11369 (RNase_PH_RRP43)

257S

hexamer interface
62T, 64D, 79G, 81K, 82A, 83E, 98V, 100N, 105P, 122V, 125E, 129K, 151W, 156D, 161N, 179M, 180N, 181V, 208I, 248L, 249C, 250N, 251I, 252W, 253K, 254T, 255G, 256S, 257S, 258C, 263L, 267I
CDD
cd11369 (RNase_PH_RRP43)

258C

hexamer interface
62T, 64D, 79G, 81K, 82A, 83E, 98V, 100N, 105P, 122V, 125E, 129K, 151W, 156D, 161N, 179M, 180N, 181V, 208I, 248L, 249C, 250N, 251I, 252W, 253K, 254T, 255G, 256S, 257S, 258C, 263L, 267I
CDD
cd11369 (RNase_PH_RRP43)

263L

hexamer interface
62T, 64D, 79G, 81K, 82A, 83E, 98V, 100N, 105P, 122V, 125E, 129K, 151W, 156D, 161N, 179M, 180N, 181V, 208I, 248L, 249C, 250N, 251I, 252W, 253K, 254T, 255G, 256S, 257S, 258C, 263L, 267I
CDD
cd11369 (RNase_PH_RRP43)

267I

hexamer interface
62T, 64D, 79G, 81K, 82A, 83E, 98V, 100N, 105P, 122V, 125E, 129K, 151W, 156D, 161N, 179M, 180N, 181V, 208I, 248L, 249C, 250N, 251I, 252W, 253K, 254T, 255G, 256S, 257S, 258C, 263L, 267I
CDD
cd11369 (RNase_PH_RRP43)

GO term prediction

Biological Process

None predicted.

Molecular Function

None predicted.

Cellular Component

None predicted.

Filter view on

Entry type

Status

Per-residue features

GBC26685.1

Protein family membership

Domains and repeats

Detailed signature matches

Residue annotation

GO term prediction

Biological Process

Molecular Function

Cellular Component