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Entry type
Status
Per-residue features
Colour by
Protein
GBC23522.1
Length
312 amino acids
Protein family membership
None predicted.
Domains and repeats
-
Domain3 - 182
- Ribosomal protein S5 domain 2-type fold (IPR020568)
- Exoribonuclease, phosphorolytic domain 1 (IPR001247)
218 - 231- Ribosomal protein S5 domain 2-type fold (IPR020568)
- Ribosomal protein S5 domain 2-type fold (IPR020568)
-
Domain206 - 291
- Exoribonuclease, phosphorolytic domain 2 (IPR015847)
1
50
100
150
200
250
312
Detailed signature matches
no IPR
Unintegrated signatures
Residue annotation
-
Rrp4 interface cd1...5LRrp4 interface
5L, 6I, 7S, 8P, 9S, 10E, 12D, 13Y, 16R, 17G, 20S, 22I, 24A, 25D, 26G, 27R, 34Q, 55E, 229L
CDD
cd11367 (RNase_PH_RRP42)6IRrp4 interface
5L, 6I, 7S, 8P, 9S, 10E, 12D, 13Y, 16R, 17G, 20S, 22I, 24A, 25D, 26G, 27R, 34Q, 55E, 229L
CDD
cd11367 (RNase_PH_RRP42)7SRrp4 interface
5L, 6I, 7S, 8P, 9S, 10E, 12D, 13Y, 16R, 17G, 20S, 22I, 24A, 25D, 26G, 27R, 34Q, 55E, 229L
CDD
cd11367 (RNase_PH_RRP42)8PRrp4 interface
5L, 6I, 7S, 8P, 9S, 10E, 12D, 13Y, 16R, 17G, 20S, 22I, 24A, 25D, 26G, 27R, 34Q, 55E, 229L
CDD
cd11367 (RNase_PH_RRP42)9SRrp4 interface
5L, 6I, 7S, 8P, 9S, 10E, 12D, 13Y, 16R, 17G, 20S, 22I, 24A, 25D, 26G, 27R, 34Q, 55E, 229L
CDD
cd11367 (RNase_PH_RRP42)10ERrp4 interface
5L, 6I, 7S, 8P, 9S, 10E, 12D, 13Y, 16R, 17G, 20S, 22I, 24A, 25D, 26G, 27R, 34Q, 55E, 229L
CDD
cd11367 (RNase_PH_RRP42)12DRrp4 interface
5L, 6I, 7S, 8P, 9S, 10E, 12D, 13Y, 16R, 17G, 20S, 22I, 24A, 25D, 26G, 27R, 34Q, 55E, 229L
CDD
cd11367 (RNase_PH_RRP42)13YRrp4 interface
5L, 6I, 7S, 8P, 9S, 10E, 12D, 13Y, 16R, 17G, 20S, 22I, 24A, 25D, 26G, 27R, 34Q, 55E, 229L
CDD
cd11367 (RNase_PH_RRP42)16RRrp4 interface
5L, 6I, 7S, 8P, 9S, 10E, 12D, 13Y, 16R, 17G, 20S, 22I, 24A, 25D, 26G, 27R, 34Q, 55E, 229L
CDD
cd11367 (RNase_PH_RRP42)17GRrp4 interface
5L, 6I, 7S, 8P, 9S, 10E, 12D, 13Y, 16R, 17G, 20S, 22I, 24A, 25D, 26G, 27R, 34Q, 55E, 229L
CDD
cd11367 (RNase_PH_RRP42)20SRrp4 interface
5L, 6I, 7S, 8P, 9S, 10E, 12D, 13Y, 16R, 17G, 20S, 22I, 24A, 25D, 26G, 27R, 34Q, 55E, 229L
CDD
cd11367 (RNase_PH_RRP42)22IRrp4 interface
5L, 6I, 7S, 8P, 9S, 10E, 12D, 13Y, 16R, 17G, 20S, 22I, 24A, 25D, 26G, 27R, 34Q, 55E, 229L
CDD
cd11367 (RNase_PH_RRP42)24ARrp4 interface
5L, 6I, 7S, 8P, 9S, 10E, 12D, 13Y, 16R, 17G, 20S, 22I, 24A, 25D, 26G, 27R, 34Q, 55E, 229L
CDD
cd11367 (RNase_PH_RRP42)25DRrp4 interface
5L, 6I, 7S, 8P, 9S, 10E, 12D, 13Y, 16R, 17G, 20S, 22I, 24A, 25D, 26G, 27R, 34Q, 55E, 229L
CDD
cd11367 (RNase_PH_RRP42)26GRrp4 interface
5L, 6I, 7S, 8P, 9S, 10E, 12D, 13Y, 16R, 17G, 20S, 22I, 24A, 25D, 26G, 27R, 34Q, 55E, 229L
CDD
cd11367 (RNase_PH_RRP42)27RRrp4 interface
5L, 6I, 7S, 8P, 9S, 10E, 12D, 13Y, 16R, 17G, 20S, 22I, 24A, 25D, 26G, 27R, 34Q, 55E, 229L
CDD
cd11367 (RNase_PH_RRP42)34QRrp4 interface
5L, 6I, 7S, 8P, 9S, 10E, 12D, 13Y, 16R, 17G, 20S, 22I, 24A, 25D, 26G, 27R, 34Q, 55E, 229L
CDD
cd11367 (RNase_PH_RRP42)55ERrp4 interface
5L, 6I, 7S, 8P, 9S, 10E, 12D, 13Y, 16R, 17G, 20S, 22I, 24A, 25D, 26G, 27R, 34Q, 55E, 229L
CDD
cd11367 (RNase_PH_RRP42)229LRrp4 interface
5L, 6I, 7S, 8P, 9S, 10E, 12D, 13Y, 16R, 17G, 20S, 22I, 24A, 25D, 26G, 27R, 34Q, 55E, 229L
CDD
cd11367 (RNase_PH_RRP42) -
hexamer interface ...43Thexamer interface
43T, 44Q, 45A, 50R, 58D, 62G, 64K, 92N, 97P, 98I, 113N, 121R, 147Y, 149D, 153L, 154D, 242V, 246G, 247K, 248V, 249C, 250G, 251L, 252Q, 253K, 254S, 255G, 256G, 257G, 258S, 259I, 264L, 265N, 268V, 269Q, 271G, 272R
CDD
cd11367 (RNase_PH_RRP42)44Qhexamer interface
43T, 44Q, 45A, 50R, 58D, 62G, 64K, 92N, 97P, 98I, 113N, 121R, 147Y, 149D, 153L, 154D, 242V, 246G, 247K, 248V, 249C, 250G, 251L, 252Q, 253K, 254S, 255G, 256G, 257G, 258S, 259I, 264L, 265N, 268V, 269Q, 271G, 272R
CDD
cd11367 (RNase_PH_RRP42)45Ahexamer interface
43T, 44Q, 45A, 50R, 58D, 62G, 64K, 92N, 97P, 98I, 113N, 121R, 147Y, 149D, 153L, 154D, 242V, 246G, 247K, 248V, 249C, 250G, 251L, 252Q, 253K, 254S, 255G, 256G, 257G, 258S, 259I, 264L, 265N, 268V, 269Q, 271G, 272R
CDD
cd11367 (RNase_PH_RRP42)50Rhexamer interface
43T, 44Q, 45A, 50R, 58D, 62G, 64K, 92N, 97P, 98I, 113N, 121R, 147Y, 149D, 153L, 154D, 242V, 246G, 247K, 248V, 249C, 250G, 251L, 252Q, 253K, 254S, 255G, 256G, 257G, 258S, 259I, 264L, 265N, 268V, 269Q, 271G, 272R
CDD
cd11367 (RNase_PH_RRP42)58Dhexamer interface
43T, 44Q, 45A, 50R, 58D, 62G, 64K, 92N, 97P, 98I, 113N, 121R, 147Y, 149D, 153L, 154D, 242V, 246G, 247K, 248V, 249C, 250G, 251L, 252Q, 253K, 254S, 255G, 256G, 257G, 258S, 259I, 264L, 265N, 268V, 269Q, 271G, 272R
CDD
cd11367 (RNase_PH_RRP42)62Ghexamer interface
43T, 44Q, 45A, 50R, 58D, 62G, 64K, 92N, 97P, 98I, 113N, 121R, 147Y, 149D, 153L, 154D, 242V, 246G, 247K, 248V, 249C, 250G, 251L, 252Q, 253K, 254S, 255G, 256G, 257G, 258S, 259I, 264L, 265N, 268V, 269Q, 271G, 272R
CDD
cd11367 (RNase_PH_RRP42)64Khexamer interface
43T, 44Q, 45A, 50R, 58D, 62G, 64K, 92N, 97P, 98I, 113N, 121R, 147Y, 149D, 153L, 154D, 242V, 246G, 247K, 248V, 249C, 250G, 251L, 252Q, 253K, 254S, 255G, 256G, 257G, 258S, 259I, 264L, 265N, 268V, 269Q, 271G, 272R
CDD
cd11367 (RNase_PH_RRP42)92Nhexamer interface
43T, 44Q, 45A, 50R, 58D, 62G, 64K, 92N, 97P, 98I, 113N, 121R, 147Y, 149D, 153L, 154D, 242V, 246G, 247K, 248V, 249C, 250G, 251L, 252Q, 253K, 254S, 255G, 256G, 257G, 258S, 259I, 264L, 265N, 268V, 269Q, 271G, 272R
CDD
cd11367 (RNase_PH_RRP42)97Phexamer interface
43T, 44Q, 45A, 50R, 58D, 62G, 64K, 92N, 97P, 98I, 113N, 121R, 147Y, 149D, 153L, 154D, 242V, 246G, 247K, 248V, 249C, 250G, 251L, 252Q, 253K, 254S, 255G, 256G, 257G, 258S, 259I, 264L, 265N, 268V, 269Q, 271G, 272R
CDD
cd11367 (RNase_PH_RRP42)98Ihexamer interface
43T, 44Q, 45A, 50R, 58D, 62G, 64K, 92N, 97P, 98I, 113N, 121R, 147Y, 149D, 153L, 154D, 242V, 246G, 247K, 248V, 249C, 250G, 251L, 252Q, 253K, 254S, 255G, 256G, 257G, 258S, 259I, 264L, 265N, 268V, 269Q, 271G, 272R
CDD
cd11367 (RNase_PH_RRP42)113Nhexamer interface
43T, 44Q, 45A, 50R, 58D, 62G, 64K, 92N, 97P, 98I, 113N, 121R, 147Y, 149D, 153L, 154D, 242V, 246G, 247K, 248V, 249C, 250G, 251L, 252Q, 253K, 254S, 255G, 256G, 257G, 258S, 259I, 264L, 265N, 268V, 269Q, 271G, 272R
CDD
cd11367 (RNase_PH_RRP42)121Rhexamer interface
43T, 44Q, 45A, 50R, 58D, 62G, 64K, 92N, 97P, 98I, 113N, 121R, 147Y, 149D, 153L, 154D, 242V, 246G, 247K, 248V, 249C, 250G, 251L, 252Q, 253K, 254S, 255G, 256G, 257G, 258S, 259I, 264L, 265N, 268V, 269Q, 271G, 272R
CDD
cd11367 (RNase_PH_RRP42)147Yhexamer interface
43T, 44Q, 45A, 50R, 58D, 62G, 64K, 92N, 97P, 98I, 113N, 121R, 147Y, 149D, 153L, 154D, 242V, 246G, 247K, 248V, 249C, 250G, 251L, 252Q, 253K, 254S, 255G, 256G, 257G, 258S, 259I, 264L, 265N, 268V, 269Q, 271G, 272R
CDD
cd11367 (RNase_PH_RRP42)149Dhexamer interface
43T, 44Q, 45A, 50R, 58D, 62G, 64K, 92N, 97P, 98I, 113N, 121R, 147Y, 149D, 153L, 154D, 242V, 246G, 247K, 248V, 249C, 250G, 251L, 252Q, 253K, 254S, 255G, 256G, 257G, 258S, 259I, 264L, 265N, 268V, 269Q, 271G, 272R
CDD
cd11367 (RNase_PH_RRP42)153Lhexamer interface
43T, 44Q, 45A, 50R, 58D, 62G, 64K, 92N, 97P, 98I, 113N, 121R, 147Y, 149D, 153L, 154D, 242V, 246G, 247K, 248V, 249C, 250G, 251L, 252Q, 253K, 254S, 255G, 256G, 257G, 258S, 259I, 264L, 265N, 268V, 269Q, 271G, 272R
CDD
cd11367 (RNase_PH_RRP42)154Dhexamer interface
43T, 44Q, 45A, 50R, 58D, 62G, 64K, 92N, 97P, 98I, 113N, 121R, 147Y, 149D, 153L, 154D, 242V, 246G, 247K, 248V, 249C, 250G, 251L, 252Q, 253K, 254S, 255G, 256G, 257G, 258S, 259I, 264L, 265N, 268V, 269Q, 271G, 272R
CDD
cd11367 (RNase_PH_RRP42)242Vhexamer interface
43T, 44Q, 45A, 50R, 58D, 62G, 64K, 92N, 97P, 98I, 113N, 121R, 147Y, 149D, 153L, 154D, 242V, 246G, 247K, 248V, 249C, 250G, 251L, 252Q, 253K, 254S, 255G, 256G, 257G, 258S, 259I, 264L, 265N, 268V, 269Q, 271G, 272R
CDD
cd11367 (RNase_PH_RRP42)246Ghexamer interface
43T, 44Q, 45A, 50R, 58D, 62G, 64K, 92N, 97P, 98I, 113N, 121R, 147Y, 149D, 153L, 154D, 242V, 246G, 247K, 248V, 249C, 250G, 251L, 252Q, 253K, 254S, 255G, 256G, 257G, 258S, 259I, 264L, 265N, 268V, 269Q, 271G, 272R
CDD
cd11367 (RNase_PH_RRP42)247Khexamer interface
43T, 44Q, 45A, 50R, 58D, 62G, 64K, 92N, 97P, 98I, 113N, 121R, 147Y, 149D, 153L, 154D, 242V, 246G, 247K, 248V, 249C, 250G, 251L, 252Q, 253K, 254S, 255G, 256G, 257G, 258S, 259I, 264L, 265N, 268V, 269Q, 271G, 272R
CDD
cd11367 (RNase_PH_RRP42)248Vhexamer interface
43T, 44Q, 45A, 50R, 58D, 62G, 64K, 92N, 97P, 98I, 113N, 121R, 147Y, 149D, 153L, 154D, 242V, 246G, 247K, 248V, 249C, 250G, 251L, 252Q, 253K, 254S, 255G, 256G, 257G, 258S, 259I, 264L, 265N, 268V, 269Q, 271G, 272R
CDD
cd11367 (RNase_PH_RRP42)249Chexamer interface
43T, 44Q, 45A, 50R, 58D, 62G, 64K, 92N, 97P, 98I, 113N, 121R, 147Y, 149D, 153L, 154D, 242V, 246G, 247K, 248V, 249C, 250G, 251L, 252Q, 253K, 254S, 255G, 256G, 257G, 258S, 259I, 264L, 265N, 268V, 269Q, 271G, 272R
CDD
cd11367 (RNase_PH_RRP42)250Ghexamer interface
43T, 44Q, 45A, 50R, 58D, 62G, 64K, 92N, 97P, 98I, 113N, 121R, 147Y, 149D, 153L, 154D, 242V, 246G, 247K, 248V, 249C, 250G, 251L, 252Q, 253K, 254S, 255G, 256G, 257G, 258S, 259I, 264L, 265N, 268V, 269Q, 271G, 272R
CDD
cd11367 (RNase_PH_RRP42)251Lhexamer interface
43T, 44Q, 45A, 50R, 58D, 62G, 64K, 92N, 97P, 98I, 113N, 121R, 147Y, 149D, 153L, 154D, 242V, 246G, 247K, 248V, 249C, 250G, 251L, 252Q, 253K, 254S, 255G, 256G, 257G, 258S, 259I, 264L, 265N, 268V, 269Q, 271G, 272R
CDD
cd11367 (RNase_PH_RRP42)252Qhexamer interface
43T, 44Q, 45A, 50R, 58D, 62G, 64K, 92N, 97P, 98I, 113N, 121R, 147Y, 149D, 153L, 154D, 242V, 246G, 247K, 248V, 249C, 250G, 251L, 252Q, 253K, 254S, 255G, 256G, 257G, 258S, 259I, 264L, 265N, 268V, 269Q, 271G, 272R
CDD
cd11367 (RNase_PH_RRP42)253Khexamer interface
43T, 44Q, 45A, 50R, 58D, 62G, 64K, 92N, 97P, 98I, 113N, 121R, 147Y, 149D, 153L, 154D, 242V, 246G, 247K, 248V, 249C, 250G, 251L, 252Q, 253K, 254S, 255G, 256G, 257G, 258S, 259I, 264L, 265N, 268V, 269Q, 271G, 272R
CDD
cd11367 (RNase_PH_RRP42)254Shexamer interface
43T, 44Q, 45A, 50R, 58D, 62G, 64K, 92N, 97P, 98I, 113N, 121R, 147Y, 149D, 153L, 154D, 242V, 246G, 247K, 248V, 249C, 250G, 251L, 252Q, 253K, 254S, 255G, 256G, 257G, 258S, 259I, 264L, 265N, 268V, 269Q, 271G, 272R
CDD
cd11367 (RNase_PH_RRP42)255Ghexamer interface
43T, 44Q, 45A, 50R, 58D, 62G, 64K, 92N, 97P, 98I, 113N, 121R, 147Y, 149D, 153L, 154D, 242V, 246G, 247K, 248V, 249C, 250G, 251L, 252Q, 253K, 254S, 255G, 256G, 257G, 258S, 259I, 264L, 265N, 268V, 269Q, 271G, 272R
CDD
cd11367 (RNase_PH_RRP42)256Ghexamer interface
43T, 44Q, 45A, 50R, 58D, 62G, 64K, 92N, 97P, 98I, 113N, 121R, 147Y, 149D, 153L, 154D, 242V, 246G, 247K, 248V, 249C, 250G, 251L, 252Q, 253K, 254S, 255G, 256G, 257G, 258S, 259I, 264L, 265N, 268V, 269Q, 271G, 272R
CDD
cd11367 (RNase_PH_RRP42)257Ghexamer interface
43T, 44Q, 45A, 50R, 58D, 62G, 64K, 92N, 97P, 98I, 113N, 121R, 147Y, 149D, 153L, 154D, 242V, 246G, 247K, 248V, 249C, 250G, 251L, 252Q, 253K, 254S, 255G, 256G, 257G, 258S, 259I, 264L, 265N, 268V, 269Q, 271G, 272R
CDD
cd11367 (RNase_PH_RRP42)258Shexamer interface
43T, 44Q, 45A, 50R, 58D, 62G, 64K, 92N, 97P, 98I, 113N, 121R, 147Y, 149D, 153L, 154D, 242V, 246G, 247K, 248V, 249C, 250G, 251L, 252Q, 253K, 254S, 255G, 256G, 257G, 258S, 259I, 264L, 265N, 268V, 269Q, 271G, 272R
CDD
cd11367 (RNase_PH_RRP42)259Ihexamer interface
43T, 44Q, 45A, 50R, 58D, 62G, 64K, 92N, 97P, 98I, 113N, 121R, 147Y, 149D, 153L, 154D, 242V, 246G, 247K, 248V, 249C, 250G, 251L, 252Q, 253K, 254S, 255G, 256G, 257G, 258S, 259I, 264L, 265N, 268V, 269Q, 271G, 272R
CDD
cd11367 (RNase_PH_RRP42)264Lhexamer interface
43T, 44Q, 45A, 50R, 58D, 62G, 64K, 92N, 97P, 98I, 113N, 121R, 147Y, 149D, 153L, 154D, 242V, 246G, 247K, 248V, 249C, 250G, 251L, 252Q, 253K, 254S, 255G, 256G, 257G, 258S, 259I, 264L, 265N, 268V, 269Q, 271G, 272R
CDD
cd11367 (RNase_PH_RRP42)265Nhexamer interface
43T, 44Q, 45A, 50R, 58D, 62G, 64K, 92N, 97P, 98I, 113N, 121R, 147Y, 149D, 153L, 154D, 242V, 246G, 247K, 248V, 249C, 250G, 251L, 252Q, 253K, 254S, 255G, 256G, 257G, 258S, 259I, 264L, 265N, 268V, 269Q, 271G, 272R
CDD
cd11367 (RNase_PH_RRP42)268Vhexamer interface
43T, 44Q, 45A, 50R, 58D, 62G, 64K, 92N, 97P, 98I, 113N, 121R, 147Y, 149D, 153L, 154D, 242V, 246G, 247K, 248V, 249C, 250G, 251L, 252Q, 253K, 254S, 255G, 256G, 257G, 258S, 259I, 264L, 265N, 268V, 269Q, 271G, 272R
CDD
cd11367 (RNase_PH_RRP42)269Qhexamer interface
43T, 44Q, 45A, 50R, 58D, 62G, 64K, 92N, 97P, 98I, 113N, 121R, 147Y, 149D, 153L, 154D, 242V, 246G, 247K, 248V, 249C, 250G, 251L, 252Q, 253K, 254S, 255G, 256G, 257G, 258S, 259I, 264L, 265N, 268V, 269Q, 271G, 272R
CDD
cd11367 (RNase_PH_RRP42)271Ghexamer interface
43T, 44Q, 45A, 50R, 58D, 62G, 64K, 92N, 97P, 98I, 113N, 121R, 147Y, 149D, 153L, 154D, 242V, 246G, 247K, 248V, 249C, 250G, 251L, 252Q, 253K, 254S, 255G, 256G, 257G, 258S, 259I, 264L, 265N, 268V, 269Q, 271G, 272R
CDD
cd11367 (RNase_PH_RRP42)272Rhexamer interface
43T, 44Q, 45A, 50R, 58D, 62G, 64K, 92N, 97P, 98I, 113N, 121R, 147Y, 149D, 153L, 154D, 242V, 246G, 247K, 248V, 249C, 250G, 251L, 252Q, 253K, 254S, 255G, 256G, 257G, 258S, 259I, 264L, 265N, 268V, 269Q, 271G, 272R
CDD
cd11367 (RNase_PH_RRP42)
GO term prediction
Biological Process
None predicted.
Molecular Function
None predicted.
Cellular Component
None predicted.